UFO10206.5prime Sequence
1130 bp (975 high quality bases) assembled on 2011-11-10
> UFO10206.5prime
CAGTCGACATGGCAGCGGGAAGAGCAGCCGCTACGCTGGAGGCTCCGGGA
CCGCCCAGCGGTCAGGACATAGCCAGCGACAACAGCGCCCAGCGCCGCAC
GCTGGCGACGAAGGTGCGTCGAAAAGGGCCACGCCCCCAACGGCGCCTGC
ACCCGCCCCTGCGCCCTCGCCTGCCGCTCCATTTGCACCTGCTACTCTGG
CTGCTGTGCTGCTGTTCTCAGCTGGGCCAGCTGAGGGCCGAGTGTCCAGC
GGTGTGCGAGTGCAAGTGGAAGAGTGGCAAGGAGTCCGTCTTGTGCCTTA
ACGCCAACCTAACCCACATCCCGCAGCCGCTGGACGCGGGAACTCAGTTG
CTGGACCTTAGCGGCAATGAGATCCAACTAATACCCGACGATAGCTTCGC
AACCGCCCAGTTGCTCAACCTACAGAAGGTGTACCTGGCCAGGTGTCACC
TCCGGCTTATCGAACGCCATGCCTTCCGTAAGCTGATCAATCTAGTGGAA
CTGGATCTAAGCCAGAACCTGCTCTCGGCAATACCCTCATTGGCGCTCTA
CCATGTCTCAGAGCTAAGGGAGCTCCGACTGAGTGGCAATCCCATACTGA
GAGTGCCAGACGATGCATTTGGTCATGTCCCACAATTGGTGAAGCTGGAG
CTGAGCGACTGCCGCCTTTCGCACATCGCTGTGCGAGCATTTGCCGGGCT
GGAGAGCAGTCTGGAGTGGCTAAAACTGGATGGGAATCGGCTGAGCGAGG
TCAGGAGTGGCACGATCACCTCGCTGGCTTCACTGCATGGTCTGGAGTTG
GCGCGCAATACCTGGAATTGCAGCTGCTCCTTGCGTCCTTTGAGGGCCTG
GATGCTGCAGCAGAATATACCCGAGTGGCATACCGCCCAACATGTGAGTC
TCCTTCGTAGATTGTCGGGGAGGGCTTGGGGATAGCTCGATGTAGATGAC
TTTGCGTGCGTTCCACAATGGGGCCACGGACACCCACAGCCGCATGGGAG
TGGAAGGGCAAGGACCTATACCATGAAGCTTGCTACCGTGGAGGGAGTAC
CCCACCGGGCTGTCTCAAGTGGCCTGCCCTAAAACCCGAACTGGATAAGC
CAATCTCCCATGTCGCTGGGCGGGATGGGT
UFO10206.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:45:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| kek3-RB | 4696 | CG4192-RB | 679..1761 | 9..1107 | 4815 | 97 | Plus |
| kek3-RA | 4361 | CG4192-RA | 743..1825 | 9..1107 | 4815 | 97 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:45:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 15578953..15579927 | 9..984 | 4585 | 98.9 | Plus |
Blast to na_te.dros performed on 2014-11-27 00:45:01 has no hits.
UFO10206.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-11-15 11:40:09 Download gff for
UFO10206.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| kek3-RB | 677..1653 | 5..984 | 98 | == | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:33:24 Download gff for
UFO10206.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| kek3-RA | 741..1717 | 5..984 | 98 | == | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:15:30 Download gff for
UFO10206.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| kek3-RA | 741..1717 | 5..984 | 98 | == | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 01:15:30 Download gff for
UFO10206.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 15578951..15579927 | 5..984 | 98 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:33:24 Download gff for
UFO10206.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 15578951..15579927 | 5..984 | 98 | == | Plus |
