UFO10215.5prime Sequence
1093 bp (984 high quality bases) assembled on 2011-11-10
> UFO10215.5prime
CAGTCGACATGACGATTTTGTACAAAGTGGAGGGCAAGGAGTTCAGCAAG
GACAGCGTTTTTCCGCACAAGAAGGTCCTCTGCTCAGTCTCCGCACGGAA
CATCGTTGCGTTTAGCGCCCTCCAGAGCGCCATATTTCCGGCTTCCCACG
GAGGAGATGCCGGCGATGGATCCTTGCCGGGAGCGGGTTTGGCCGTAGGC
GCGAGCAACAGCCATGTGTACGTGTGCGACATCGTGACGCCGTGGGAATA
CTATAAGGTGTGCTCCTCCAAATCGCTTATCAGCGTCCTCCAGTGGAGTC
CCAATGGGGAGCAACTGCTGCTTGGATACGTCGGCGGTCGCGTCGAGATC
TGGCAGCCGAGGAACCAGTCAATTAACCTATGGGTGCTGCAGTATTACGC
CACCGTGCCCAGCGAGGACATTATAGAAGCACAGTTCTTTCAGAATGGCA
AAGGAGTGATCTTCAATGCGCTGAAGAAGGATCACACCTACTATGCGGAG
AAGTTCGAGCGGGTGGAGCAGCAGAGGCCCACTCTCAGCGGATTTGGCGG
AGTGGCCAGCGAGGGATGCGTGCTACTCACTTCCTCAGGCCTGCTGGCCG
CCTTCAGTCTCCCCGCAATCCAAAAGACATCCGCCGCAGGAGCTGATGGT
CCTGCCCACGAGGTCGTCGAGTTGACACCCGCGCTCCACAGCATCGGCAT
ATCGCGCAGCTTCATCGAACACTGCAGCATGACGCCAAGTCCATCGGGAG
CCCTTAATATCGCTTTCAGCTGTGGCTGGCAGCAACAGTTGGTGCAATGC
TTTAATGTCTCGCTTTCATTGGAGGGCGAACTGGGTCTGGAGCAGCACTT
GGCCATCAAATCCGAGTCCCAGACCAGCATATTTCTGGGTCCTCTTGACG
GGAGGCGGATCAGTCACCTAAAACGGACGCGAATAGCCAACGAGGATGTG
ATTTTTATAGCCTACGCTTGTCCAGAATGGTGCTGCAGCAACTGAAGCAA
TGGACATTGACCACGCGGTCACCAAGTGTCCACGCCCTCCTCCAGGGTGG
AAGGAAGGTGCACATACAGCCAATGATCCGCATTCGAAGCCTG
UFO10215.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:45:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| MED16-RA | 2755 | CG5465-RA | 74..1117 | 9..1051 | 5030 | 99 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:45:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 22183211..22184254 | 9..1051 | 4905 | 99 | Plus |
Blast to na_te.dros performed on 2014-11-27 00:45:46 has no hits.
UFO10215.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-11-15 11:40:12 Download gff for
UFO10215.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| MED16-RA | 65..1134 | 9..1077 | 98 | -> | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:33:55 Download gff for
UFO10215.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| MED16-RA | 74..1143 | 9..1077 | 98 | -> | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:15:53 Download gff for
UFO10215.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| MED16-RA | 74..1143 | 9..1077 | 98 | -> | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 01:15:53 Download gff for
UFO10215.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 22183211..22184280 | 9..1077 | 98 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:33:55 Download gff for
UFO10215.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 18070716..18071785 | 9..1077 | 98 | -> | Plus |
