UFO10226.5prime Sequence
1086 bp (976 high quality bases) assembled on 2011-11-10
> UFO10226.5prime
CAGTCGACATGACGGACGTGCCGGAGCCCGTGCGCAAGTGCGCCAGCCTG
TTGAAGGGCACGAAGAGCGACACTGAAAAATTCGCCGCCCTCTTTATGGT
CACCAAGCTGGTCAAGGGCAAGGACTGCAATGCGGCGGGCAAGAAGCTGC
TGTTCGAGGCCATAGGGTTTCCCTTCCTCAAGAAGCTGCTAGTGTCCAAG
GATCTGCCCAACGATTGTCCGCCGTTAGTTTACAAGAGTGTAGCTCTCTC
GATCCTCACGTGCTTTTGCCAGGAGGAGGAGTTAGCCACCCATAAGGACA
TCATCGACGCCATACCCACGCTCCTGGAAATCGTTGAGCAGGCCGATGAC
GAGGACTACGAGGATAACCTAATCGTGGTCAGCGAGGCGTATAGTTGCCT
CAAGAGCATCGCCAGCCATGAGCCAGGCCAGCAGGCCCTTCTGGCCACCG
GAGCCATCCCCAAGATGTCGCAGATATACTCCGCCCAGAGTTTCCAGACC
GATGAGGCCTTGCACCTGATCGTGCTGCTTGTTAAGCAGTTTGGAGTGGT
ATCATGGCCCGAGGATCCCACTGCCTTCCATGCTCTGATCCAGAGGATCG
CTTTGGACATGGAAACCGATGACACGGAGAGAAAGTACGAGCTCTGCCGT
ATCTTGGCTGATATCCTTATTACCTGCCGTCGTGAGATTGTGATTAATTC
TCTGGAGGGTCAGATCTGGCCGGAGAGCTTGTTCAAGGGCTGTGGAGATA
TTCTGAATGCCAAGATTGGCCCCAAGCAAATGGATCCTGCACTGCATCTA
ATAGCCACCACCTTGCATGTGCTGGGCATCCAATGGGCCTTCATGGACGA
GCAGAAGACTTTCTTCCTGCAGCTCCTCCAACTGGGAGCTATCGAGGTGC
GCATGCAAATGGATGAGAAAAACTGAAACCACCTTCAGCAGGCGGAGCTG
CTCACTGCTGCTTCTCATTCTGGAGCATTCCATTGAGTATATGGCTACGG
ATCAGCTGGATCTAGAGCCCAGGAGAAACAGAACCACTTACCCAGCTCTC
AGGGCGCCTCACAGGTCTGCCGTTGACCTGGTTAGC
UFO10226.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:12:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Neurochondrin-RA | 2580 | CG2330-RA | 237..1293 | 9..1059 | 5015 | 98.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:12:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 6468673..6469720 | 9..1051 | 4825 | 98.7 | Plus |
Blast to na_te.dros performed on 2014-11-27 20:12:42 has no hits.
UFO10226.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-11-15 11:40:20 Download gff for
UFO10226.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Neurochondrin-RA | 258..1332 | 1..1069 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:44:32 Download gff for
UFO10226.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Neurochondrin-RA | 233..1307 | 1..1069 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:16:30 Download gff for
UFO10226.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Neurochondrin-RA | 233..1307 | 1..1069 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:16:30 Download gff for
UFO10226.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 6468669..6469743 | 1..1069 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:44:32 Download gff for
UFO10226.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 2294391..2295465 | 1..1069 | 98 | | Plus |
