UFO10239.5prime Sequence
1063 bp (959 high quality bases) assembled on 2011-11-10
> UFO10239.5prime
CAGTCGACATGTGCAAGATCCTTCCTCTTTTCGTCCTGGCGGTCATGGTG
GCCTGTGGTCAAGCTCTTCCCGTAGATCCCGAACGTGAACCCGTGGCTAT
CCTGAAGTCCGAGATCATCAAGACAGAGGAGGGCTACACCAGCGCCTACG
TGGGAGCAGATGGTATATCTCGCAACGAGGAGGCTTTTTTGGTGGACAAG
GGTACCGACGAGGAGGCTCTGGAGGTGAAGGGATCCTACAAGTACATAAA
CGAAGACGGCCAGGAGGTGGAGGTGTTCTATACGGCGGGAAAGAACGGAT
TTGTTCCCTACGGCAGCATTATCAATCCGGAAATCACGGCCGTTGCCGAA
GCAGCCAAGGATCTGCCAAAGGTGGAGAAGGTGGAGAAGGCGGGTAGGCC
TGCAAGCTTTCTAGACCATTCGTTTGGCGCGCGGGCCCAGGTAAGTGGTC
ATAATCATAATCATAATCATAATCATAATCACAACTAGCCTAGGAGATCC
TGGTCATGACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCA
ACCGAGCGTTCTGAACAAATCCAGATGGAGTTCTGAGGTCATTACTGGAT
CTATCAACAGGAGTCCAAGCGAGCTCGATATCAAATTACGCCCCGCCCTG
CCACTCATCGCAGTACTGTTGTAATTCATTAAGCATTCTGCCGACATGGA
AGCCATCACAAACGGCATGATGAACCTGAATCGCCAGCGGCATCAGCACC
TTGTCGCCTTGCGTATAATATTTGCCCATGGTGAAAACGGGGGCGAAGAA
GTTGTCCATATTGGCCACGTTTAAATCAAAACTGGTGAAACTCACCCAGG
ATTGGCTGAGACGAAAAACATATTCTCAATAAACCCTTTAGGGAAATAGC
CAGTTTTCACCGTACACGCCACATCTTGCGAATATATGTGTAGAAACTGC
GGAAATCGTCGTGGCTATTCACTCAGAGCGATGAAACGTTCGTTTGCTCA
TGAAACGTGTAACAGGGTGAACACTATTCCAATCACAGCTCACGGTCTTT
CAATGCCATACGA
UFO10239.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:14:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Cpr47Ec-RA | 744 | CG9077-RA | 138..530 | 9..401 | 1965 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:14:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 11259320..11259700 | 401..21 | 1905 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 20:14:16 has no hits.
UFO10239.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-11-15 11:40:27 Download gff for
UFO10239.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cpr47Ec-RA | 1..396 | 9..402 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:45:21 Download gff for
UFO10239.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cpr47Ec-RA | 130..530 | 1..401 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:17:08 Download gff for
UFO10239.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cpr47Ec-RA | 130..530 | 1..401 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed on 2014-11-27 21:17:08 has no hits.
Sim4 to na_arms.dmel.RELEASE5 performed on 2013-08-04 17:45:21 has no hits.
