Clone UFO10241 Report

Search the DGRC for UFO10241

Clone and Library Details

Library:UFO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2008-06-20
Comments:BD Creator expression clones with C-terminus FLAG HA tag for transgenic expression using PhiC31 integrase system
Original Plate Number:102
Well:41
Vector:pUAST-CFLAGHA-BD-PHI
Associated Gene/TranscriptCpr65Ax1-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

UFO10241.5prime Sequence

1093 bp (970 high quality bases) assembled on 2011-11-10

> UFO10241.5prime
CAGTCGACATGAAATTCGCCATCGTCCTGTTCGCCCTCTTTGCCGTGGCC
CTGGCTGCCCCTACTGTCGAGGTCCTGCGATCGGATAGCAATGTTGGAAT
CGATAACTACTCATATGCAGTTGAAACCAGCGACGGTACCTCGAAGAGCG
AGGAGGGTGTGCTGAAGAACGCCGGCACCGAGCTAGAGGCCATCTCAACC
CACGGCTCCTTCAGCTACGTGGGCCCTGATGGCCAGACCTACACCGTCAC
CTACGTGGCCGATGAGAACGGATTCCAGCCCCAGGGTGCTCATCTGCCCG
TTGCCCCCGTTGCCGCAAGCTTTCTAGACCATTCGTTTGGCGCGCGGGCC
CAGGTAAGTGGTCATAATCATAATCATAATCATAATCATAATCACAACTA
GCCTAGGAGATCCTGGTCATGACTAGTGCTTGGATTCTCACCAATAAAAA
ACGCCCGGCGGCAACCGAGCGTTCTGAACAAATCCAGATGGAGTTCTGAG
GTCATTACTGGATCTATCAACAGGAGTCCAAGCGAGCTCGATATCAAATT
ACGCCCCGCCCTGCCACTCATCGCAGTACTGTTGTAATTCATTAAGCATT
CTGCCGACATGGAAGCCATCACAAACGGCATGATGAACCTGAATCGCCAG
CGGCATCAGCACCTTGTCGCCTTGCGTATAATATTTGCCCATGGTGAAAA
CGGGGGCGAAGAAGTTGTCCATATTGGCCACGTTTAAATCAAAACTGGTG
AAACTCACCCAGGGATTGGCTGAGACGAAAAACATATTCTCAATAAACCC
TTTAGGGAAATAGGCCAGGTTTTCACCGTAACACGCCACATCTTGCGAAT
ATATGTGTAGAAACTGCCGGAAATCGTCGTGTATTCACTCAGGAGCGATG
AAAACGTTTCAGTTTGCTCATGGAAATCGGTGTAACAGGGTGACACTATC
CCATATCACCAGCCTCACCGTTTTTTCAATTGCCATACGAATTCCCGGAT
GACATTCATCAGGGGCCAGAATGTGAATAAGACCGAATAACTTGTGCCTT
ATTTTTCTTACGTCTCTAAAAAGCCGTATATCAGCTGACGTCT

UFO10241.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:14:33
Subject Length Description Subject Range Query Range Score Percent Strand
Cpr65Ax1-RA 389 CG34270-RA 49..354 9..314 1530 100 Plus
Cpr65Ax2-RB 732 CG18777-RB 48..353 9..314 1530 100 Plus
Cpr65Ax2-RA 388 CG18777-RA 48..353 9..314 1530 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:14:31
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 6147566..6147761 314..119 980 100 Minus
3L 28110227 3L 6150437..6150632 314..119 980 100 Minus
3L 28110227 3L 6147830..6147939 118..9 550 100 Minus
3L 28110227 3L 6150701..6150810 118..9 550 100 Minus
3L 28110227 3L 6133157..6133244 314..227 320 90.9 Minus
3L 28110227 3L 6134842..6134925 310..227 315 91.7 Minus
3L 28110227 3L 6145140..6145289 150..299 300 80 Plus
3L 28110227 3L 6130558..6130641 310..227 300 90.5 Minus
3L 28110227 3L 6137725..6137830 305..200 290 84.9 Minus
3L 28110227 3L 6136387..6136470 310..227 270 88.1 Minus
3L 28110227 3L 6139425..6139574 299..150 225 76.7 Minus
3L 28110227 3L 6146961..6147032 242..313 225 87.5 Plus
3L 28110227 3L 6149832..6149903 242..313 225 87.5 Plus
3L 28110227 3L 6143800..6143871 228..299 195 84.7 Plus
Blast to na_te.dros performed on 2014-11-27 20:14:32 has no hits.

UFO10241.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-11-15 11:40:28 Download gff for UFO10241.5prime
Subject Subject Range Query Range Percent Splice Strand
Cpr65Ax1-RA 39..357 1..322 97   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:45:27 Download gff for UFO10241.5prime
Subject Subject Range Query Range Percent Splice Strand
Cpr65Ax1-RA 42..360 1..322 97   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:17:14 Download gff for UFO10241.5prime
Subject Subject Range Query Range Percent Splice Strand
Cpr65Ax2-RA 41..359 1..322 97   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:17:14 Download gff for UFO10241.5prime
Subject Subject Range Query Range Percent Splice Strand
3L 6147566..6147761 119..314 100 <- Minus
3L 6147830..6147946 1..118 96   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:45:27 Download gff for UFO10241.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 6140666..6140861 119..314 100 <- Minus
arm_3L 6140930..6141046 1..118 96   Minus