UFO10249.5prime Sequence
1115 bp (987 high quality bases) assembled on 2011-11-10
> UFO10249.5prime
CAGTCGACATGTTTAGCCAGCACAACGGTGCAGCAGTACATGGCCTTCGG
CTCCAGTCGCTGCTCATCGCAGCCATGCTCACCGCTGCAATGGCAATGGT
CACGCCGACTGGCAGTGGTCACCAGTTGCTGCCCCCCGGAAACCACAAAC
TCTGCGGCCCCGCACTGTCCGATGCCATGGATGTGGTGTGTCCCCATGGC
TTTAATACGCTGCCAAGGAAACGTGAAAGCTTGCTGGGCAACAGCGACGA
CGACGAGGACACGGAGCAGGAGGTGCAGGATGATAGCAGCATGTGGCAGA
CACTGGACGGGGCAGGATACTCTTTTAGTCCACTGCTAACCAATCTGTAC
GGATCCGAGGTCCTGATCAAGATGCGTCGCCACAGGAGACACCTGACCGG
TGGCGTCTACGACGAGTGCTGCGTCAAGACCTGCAGCTACTTGGAGTTAG
CCATCTACTGTCTACCGAAAGCAAGCTTTCTAGACCATTCGTTTGGCGCG
CGGGCCCAGGTAAGTGGTCATAATCATAATCATAATCATAATCATAATCA
CAACTAGCCTAGGAGATCCTGGTCATGACTAGTGCTTGGATTCTCACCAA
TAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACAAATCCAGATGGAGT
TCTGAGGTCATTACTGGATCTATCAACAGGAGTCCAAGCGAGCTCGATAT
CAAATTACGCCCCGCCCTGCCACTCATCGCAGTACTGTTGTAATTCATTA
AGCATTCTGCCGACATGGAAGCCATCACAAACGGCATGATGAACCTGAAT
CGCCAGCGGCATCAGCACCTTGTCGCCTTGCGTATAATATTTTGCCCATG
GTGAAAACGGGGGCGAAGAAGTTGTCCATATTGGCCACGTTTAAATCAAA
ACTGGTGAAACTCACCCAGGGATTGGCTGAGACGAAAAAACATATTCTTC
AATAAACCCTTTAAGGGAAATAGGCCAGGGTTTTCACCCGTACACGCCAC
CATCTTGGCGAAATATATGTTGTAGAACCTGCCGGAAAATCGTCCTGGTA
TTCACTCGACGATGAACGTCAGTGCTATGAACGGTTACAGGTGACTCCAT
ACCAGCACGCTTCTG
UFO10249.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:15:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Ilp1-RA | 465 | CG14173-RA | 1..462 | 9..470 | 2310 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:15:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 9798434..9798895 | 9..470 | 2310 | 100 | Plus |
| 2L | 23513712 | 2L | 23338273..23338510 | 9..246 | 1070 | 96.6 | Plus |
Blast to na_te.dros performed on 2014-11-27 20:15:36 has no hits.
UFO10249.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-11-15 11:40:33 Download gff for
UFO10249.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ilp1-RA | 1..465 | 9..471 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:46:01 Download gff for
UFO10249.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ilp1-RA | 1..465 | 9..471 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:17:39 Download gff for
UFO10249.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ilp1-RA | 1..465 | 9..471 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed on 2014-11-27 21:17:39 has no hits.
Sim4 to na_arms.dmel.RELEASE5 performed on 2013-08-04 17:46:01 has no hits.
