UFO10250.5prime Sequence
1074 bp (964 high quality bases) assembled on 2011-11-10
> UFO10250.5prime
CAGTCGACATGGATTCAGATGCCGATGGTGGCGAGACCGTTTCGAATTTC
TCTGAAAATTCGACGGATTTTGAAGAAACTGAGGAGTATATTGTAGAGAG
GATTTTGGATCGAAGGCATTATATGGGCCAATTACAATACTTGGTCAAAT
GGCTGGATTATAGCGATGAAGATAATACCTGGGAATCGGCAGCAGATCTC
GATTGCCATTCACTTATTGATTCGATTGAATCACAAAAAAGTCTGAAGAG
GGGTCAAGAGCTGAATAATCAATATGAAACTAAAGCTAAACGACTGAAAA
TCGATCCATGTCTAGTAGTAGATAGTCCTTTTAATCATGGTTTCACTGCA
CAAGAGATTCTAAAAGGCGCTAAAAACAATGGTGAAATATCGTTTTTAAT
TAGGTTTTGGCATCTCGATCAACCACAAGTGGTGCCAAGTGGAATTGCAT
ATGTGGAAATACCGCAGATGGTTCTGAAATTCTATGAAAATCATTGCAAT
TTTCACGATTATTTAAATAATTATATATCAGCAAGCTTTCTAGACCATTC
GTTTGGCGCGCGGGCCCAGGTAAGTGGTCATAATCATAATCATAATCATA
ATCATAATCACAACTAGCCTAGGAGATCCTGGTCATGACTAGTGCTTGGA
TTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACAAATC
CAGATGGAGTTCTGAGGTCATTACTGGATCTATCAACAGGAGTCCAAGCG
AGCTCGATATCAAATTACGCCCCGCCCTGCCACTCATCGCAGTACTGTTT
GTAATTCATTAAGCATTCTGCCGACATGGAAGCCATCACAACCGGCATGA
TGAACCTGAATCGCCAGCGGCATCAGCACCTTGTCGCCTTGCGTATATAT
TTGCCCATGGTGAAAACGGGGGCGAGAGGTTGTCCATATTGGGCACGTTA
ATCAAACTGGGTGAAACTCACCCAGGGATGCTGAACGAAAACTAATATTC
TCTCAATACCCTCTTTTGGGGAAATAGGCAGGCTTCACCGTAACACGCCC
AATCCTGCAATATATGGGTTAGAA
UFO10250.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:15:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| HP1e-RA | 592 | CG8120-RA | 57..578 | 9..530 | 2610 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:15:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 9321826..9322347 | 9..530 | 2610 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 20:15:44 has no hits.
UFO10250.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-11-15 11:40:34 Download gff for
UFO10250.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| HP1e-RA | 57..584 | 9..538 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:46:04 Download gff for
UFO10250.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| HP1e-RA | 57..584 | 9..538 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:17:43 Download gff for
UFO10250.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| HP1e-RA | 57..584 | 9..538 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:17:43 Download gff for
UFO10250.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 9321826..9322347 | 9..530 | 100 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:46:04 Download gff for
UFO10250.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 5147548..5148069 | 9..530 | 100 | == | Plus |
