UFO10254.5prime Sequence
1073 bp (996 high quality bases) assembled on 2011-11-10
> UFO10254.5prime
CAGTCGACATGCTAAAATCCGCAAGTGCTTTGCTATGTGGTCTTCTTGCT
TTAAATTTGTATGGAGCTTGGGCAGAATCCGATGTGATTTGTCCTTTAAA
GGACCCTCCTAGTCAATGTGGAGGATTCTGTCTGGGTGTACTTACGCCCG
TGTTAAATCACCTGACCATTTCCCAAAATCTGGCGAATTCCAATAATTCA
AGCAAGGCTAACGAGGTCCTGGTGAGACAGTACACGATGGAAGGCCAACT
GACTGCTCTGCAGAATAAGCAACTAAGCATTGAAGTCGCACTGGATGCCC
AAGGCAGAAAACTGAATGTTAACGAACAGAACTTTACTGAACGACTGAAT
TGCATGGAAGGCATACTGTCGGCCCTGGAGAAAACAGTCCTTGAAGTAAA
AACCAAAATAAAATACCTCGGATTCGAGCAAATCGGCTCAAAGTACTATT
ACATAGAGAAAGTATCCGAGAAGAACTGGTCCACTGCTTCAAAAACTTGT
CGCAATATGGGAGGGCACCTGGCCGACATTAAGGACGAGGCAGATCTAGC
CGCCATCAAGGCGAATCTCAAGGAGGACACGCATTACTGGCTGGGAATCA
ATGACTTGGACCACGAGGGAAAATTCTTGTCCATGCCCACGGGCAAGCAG
ACTACCTTTTTGAAATGGGCCTCGGGGAGACCCTCTCAGTTGGACACCCT
CAACTGCGTGTTCCTATACAACGGGGAAATGTACGATTACCCATGCCACT
ATACTTTCCGGTTCATTTGCCAGACCGAGGAGGAAGATTTAAATGTAGCA
AGCTTTCTAGACCATTCGTTTGGCGCGCGGGCCCAGGTAAGTGGTCATAA
TCATAATCATAATCATAATCATAATCACACTAGCCTAGAGATCCTGGTCA
TGACTAGTGCTTGGATTCTCACATAAAAACGCCGGCGGCACCGAGCGTTC
TGAACAAATCAGATGGAGTTCTGAGTCATTACTGGATCTATCAACAGGAG
TCAGCGAGCTCGATTCAATACGCCCCCGCCCTGCAATCATCGCAGTACTG
TGTAATTCATTAGCATCTGCGAA
UFO10254.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:16:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| lectin-22C-RB | 857 | CG42295-RB | 19..807 | 9..797 | 3945 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:16:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 2036459..2037247 | 797..9 | 3945 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 20:16:18 has no hits.
UFO10254.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-11-15 11:40:36 Download gff for
UFO10254.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| lectin-22C-RB | 1..792 | 9..800 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:46:19 Download gff for
UFO10254.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| lectin-22C-RB | 19..807 | 9..797 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:17:57 Download gff for
UFO10254.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| lectin-22C-RB | 19..807 | 9..797 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:17:57 Download gff for
UFO10254.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 2036459..2037247 | 9..797 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:46:19 Download gff for
UFO10254.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 2036459..2037247 | 9..797 | 100 | | Minus |
