UFO10257.5prime Sequence
1082 bp (981 high quality bases) assembled on 2011-11-10
> UFO10257.5prime
CAGTCGACATGGATTCATCTCGCCTGATTATCTGCCTCCTAACTTTTCTG
TTGTTTCAAACGGGAAAAGGGTTGGGGAACGGCAGTTATCTGGAGCTCAG
ATTGGATGCAGCTGCTGAATCCTGTCCAGATGATTACTACTTTAACGAAA
CTATCCAAGCCTGCGTATCTACAGACACTACCAGCTGTACCAATCACCAA
ATCGGCAAATGTCCGATGGCCACAGAAATGGACGAGTTTTGCGTGTGCAA
AGATAAGCACCTTCAGATCTGGAAATGCCCTGAAGGAACCTACTTCGATG
CCAACCGATTGGTCTGCCGGGTGGGAAGCGTTGAGTGCCAGGACGATTAT
ACTCCATCCCCATGTCCTAACAGCACGGCAAGCGATGTCTTCTGCCTCTG
CATCGATGGCAAATGGCATCTTAACTACTGTCCAACGGGCTTTACCTTTG
ATGACGAGCTGCAGATTTGCCTGAACACAGGATCTGATGACGACGAGTTG
CCCAGTTCGTCTGGAAAGTGCCAGCGGCTTGGATTGTTTGGTGATCCCGC
TGACTGCTCTGGGTACTATCATTGTCGCGAAAAGGGCAGTGATATTGAGT
ATTTCAGATGCTCGGTAGGAACCATCTTCAATCTAATTTCCTTTGCGTGC
GTTACTGGAACTTGTGCAAGCTTTCTAGACCATTCGTTTGGCGCGCGGGC
CCAGGTAAGTGGTCATAATCATAATCATAATCATAATCATAATCACAACT
AGCCTAGGAGATCCTGGTCATGACTAGTGCTTGGATTCTCACCAATAAAA
AACGCCCGGCGGCAACCGAGCGTTCTGAACAAATCCAGATGGAGTTCTGA
GTCATTACTGGATCTATCAACAGGAGTCCAAGCGAGCTCGATATCACATT
ACCGCCCCGCCCTGCCACTCATCGCAGTACTGTTGTAATTCATTAGCATT
CTGCGACATGAAGCCATCACAAACGCATGATGATCTGATCGCAGCGCATC
AGCCACTGTTCGCTGGCTATATATTTGCCCATGTGAAACGGGCGAGAGTT
GGCTATGCCACGTTATCAAACTGTGACTCACC
UFO10257.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:16:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| obst-I-RA | 733 | CG32304-RA | 11..669 | 7..665 | 3295 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:16:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 2267868..2268526 | 7..665 | 3295 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 20:16:36 has no hits.
UFO10257.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-11-15 11:40:38 Download gff for
UFO10257.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| obst-I-RA | 1..661 | 9..667 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:46:28 Download gff for
UFO10257.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| obst-I-RA | 1..661 | 9..667 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:18:04 Download gff for
UFO10257.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| obst-I-RA | 6..669 | 1..665 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:18:04 Download gff for
UFO10257.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 2267863..2268526 | 1..665 | 99 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:46:28 Download gff for
UFO10257.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 2267863..2268526 | 1..665 | 99 | == | Plus |
