UFO10260.5prime Sequence
1100 bp (952 high quality bases) assembled on 2011-11-10
> UFO10260.5prime
CAGTCGACATGGACTTCACCAGCGACTACGCGCATCGGCGTATGGTGAAA
TTTCTGACGATCATACTGATAGGCTTTATGACCGTCTTCGGACTCCTGGC
CAATCGATATCGGGCGGGCCGTCGTGAAAGATTCCGCTTCTCAAAGGCAA
ATCTGGCCTTTGCTTCGCTGTGGGCAATTGCATTCAGCTTGGTTTACGGG
CGGCAAATCTACAAGGAGTACCAGGAGGGTCAGATCAACCTGAAGGACGC
CACCACTCTGTACAGCTATATGAACATTACGGTGGCTGTTATTAACTATG
TGTCGCAAATGATAATCAGTGACCATGTGGCCAAGGTGTTGAGCAAAGTG
CCCTTCTTTGATACCCTAAAAGAATTCCGTCTGGACAGCAGGTCGCTGTA
CATATCCATCGTTTTGGCTCTGGTCAAGACCGTGGCTTTTCCTCTAACAA
TTGAAGTGGCTTTCATACTGCAACAGAGGCGGCAGCATCCCGAGATGAGC
TTGATCTGGACCTTGTACCGGCTGTTTCCCTTAATTATTTCGAATTTTCT
CAATAACTGCTACTTTGGCGCAATGGTGGTGGTGAAGGAGATTCTGTACG
CTCTGAACAGACGGCTGGAAGCGCAGCTGCAGGAGGTGAATCTGCTGCAG
AGGAAGGACCAGCTAAAGTTGTACACTAAATACTACCGCATGCAGCGATT
TTGCGCCTTGGCGGATGAACTCGACCAGCTGGCGTATCGCTATATGTTGA
TATATGTGCATTCGGGAAAGTATCTGACCCCAATGTCCTTGTCCATGATT
CTGTCGCTCATATGCCACCTGCTCGGATACCGTGGGTTTCTACAGTCTGT
ACTATGCATAGCGGACACCTTAATCATGGGCAGCCGTACGATGGTCTTGG
ACCGCTGATCATTCTGGTTTCCTCTCCATCTCGCTGCCGAGTCACATTGC
TCACGCATTTGTGCACACCTATGGTGGCCACCGAAGATCGGCAGTCATTC
TCCAGAGATGATCTCCAGATGCGACGCGTACGTCAGCATCAGCTACTCGT
GTCCGGAATCATACTGCTGCATGATGCAGTACAGTCCGGCCTCGATCGGC
UFO10260.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:15:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Gr94a-RA | 1215 | CG31280-RA | 1..1029 | 9..1023 | 4730 | 98.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:15:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 23051689..23052696 | 9..1005 | 4475 | 98.1 | Plus |
Blast to na_te.dros performed on 2014-11-27 20:15:27 has no hits.
UFO10260.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-11-15 11:40:33 Download gff for
UFO10260.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Gr94a-RA | 1..1029 | 9..1023 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:45:56 Download gff for
UFO10260.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Gr94a-RA | 1..1029 | 9..1023 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:17:36 Download gff for
UFO10260.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Gr94a-RA | 1..1029 | 9..1023 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:17:36 Download gff for
UFO10260.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 23051681..23052719 | 1..1025 | 97 | <- | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:45:56 Download gff for
UFO10260.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 18877403..18878441 | 1..1025 | 97 | <- | Plus |
