UFO10262.5prime Sequence
1051 bp (973 high quality bases) assembled on 2011-11-10
> UFO10262.5prime
CAGTCGACATGTACTTCCTTAATCTTTGCCTGATTTGTACCACCATCGGT
TTGGCCGTCGGTTCACCAACCTTGGAGTACGGTCCCCCACCAACTTCGGA
TACGATCAGTCAGTATCACCACCAGGATGAGCATGGCCAGTACGCCTATG
GTTACATGGCACCACTGTATTCCAAGCACGAGACCCGCACCGTGGATGGT
GTGATCCGGGGTACCTTCTCCCACATCGATGCAAATGGCGAAACCCAGAC
CGTGGACTATGTGGCCGATGCCGAGGGCTTCCATGTAACCTCCAATCTGC
CCAATCAGCAGGCCAATCAGGAAACCCCTGAAGTGGCTGCACTGCGAACA
CAGCATCTGGAGGCCCATAACCAGGCCAAATTGAGGTTGGCCGGAGACTA
CTCCGTGGGTCCACAGCCTGTTCGGGACACTCCCGAGGTGGCCGCCGCTA
AGGTTGCATTCTTCAAGCGTTTCGAAGCCGAGAAGCTGCGCAACAAGTTG
CTCGCCGAGAAGAAAGTTCTGGTGATACCGAATCCAACTCCCATCGCTGT
TCGTTCACAGCCGATATATGTCTACCAGCCCACCACCACAGGATTCGTGT
ACAACTACCACACCAAGACGCAGGCCCAAGTTCCATCGAGGAACTACCTG
CCAGTAGTCGCAAGCTTTCTAGACCATTCGTTTGGCGCGCGGGCCCAGGT
AAGTGGTCATAATCATAATCATAATCATAATCATAATCACAACTAGCCTA
GGAGATCCTGGTCATGACTAGTGCTTGGATTCTCACCAATAAAAAACGCC
CGGCGGCAACCGAGCGTTCTGAACAAATCCAGATGGAGTTCTGAGGTCAT
TACTGGATCTATCAACAGGAGTCCAAGCGAGCTCGATATCAAATTACGCC
CGCCCTGCACTCATCGCAGTACTGTTGTAATTCATTAAGCATTCTGCGAC
ATGAAGCCATCACAAACGGCATGAAGGATCTTGATCGCCAGCGGCATCAG
CACCTTGTTCGCCTGCGTTAATATTTGCCATGTGAACCGGGGCGAGAGTG
T
UFO10262.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:16:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Cpr72Eb-RA | 809 | CG12255-RA | 99..749 | 9..659 | 3255 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:16:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 16364997..16365647 | 9..659 | 3255 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 20:16:53 has no hits.
UFO10262.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-11-15 11:40:39 Download gff for
UFO10262.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cpr72Eb-RA | 1..654 | 9..663 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:46:37 Download gff for
UFO10262.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cpr72Eb-RA | 94..757 | 2..668 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:18:09 Download gff for
UFO10262.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cpr72Eb-RA | 94..757 | 2..668 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:18:09 Download gff for
UFO10262.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 16364992..16365655 | 2..668 | 98 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:46:37 Download gff for
UFO10262.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 16358092..16358755 | 2..668 | 98 | == | Plus |
