UFO10263.5prime Sequence
1083 bp (965 high quality bases) assembled on 2011-11-10
> UFO10263.5prime
CAGTCGACATGTTTAGATTGTCAGTCTTAGTTCTGAACTTACTCCTTGTT
AGCCATGAATTCTCGGCAGGAACCGCGAAAATTGAAATTCAGCCATTACC
TGCCCTATGCAACGGATACTGCTTCCCCACCCTGAAGCCAGTTATGGAGT
ATGTTGCTATCCACCAGGACAAATGGAATACTTGTACGGAAATATTAGCG
AACGAAGCCCGCAAGGATCAGATCCAGTTGAATATCCAGCTGGATGCCTT
GAAAGCAGACGTTTCCAACATAAAGGCATCGCAGCTGTCAAAGGATGAGA
AGCTGGACAGGATGGAGCGAGAGCAGTTTGCCATGCATGAATCTTTGGAG
ACCATCAATCGGTATCTTACAGTGAAACTGGACAGAACGAAATTGCAGCT
TGAGGCGATCAAAAACACAATGGATTATATGAAGGCCCAAATGGATGGCT
ATTTCTCAGCCATAAATGGAGTTCAATGCCTACAGCCAGGATTTGAGAAG
ATAGGCGATAGATATTTTTACATCGAAGAAGATGTTGAGCTAAATTGGCT
GGATGCTCAGGCCAAATGTCGTCGAATGGGAGGTCACCTAGCCTCTATAA
AAACTAAACAGGAGTTTGACGCAATCGTAGAGAAGCTCGATGATTCGAAA
TCATACTTCCTGGGCGTCAACGAAAACACAAAAACCGGTGACTTTGTGTC
TGCAGCCTCCGGAAAAAGTTGTTTGTATCACGAGTGGGGTCCTGGTGAAC
CCCATCACAATAATGACCAAGAGCGATGCGTTTCAATCTTGCGAAAACTC
ATGCATGTGGGCAATTGTACTTATGAAAAAAGATTCATATGCCAGTATGG
CATCGCAAGCTTTCTAGACCATTCGTTTGGCGCGCGGGCCCAGGTAAGTG
TCATATCATATCATATCATATCATATCCACACTAGCCTAGAGATCTGGTC
ATGACTAGTGCTTGGATTCCTCACAATAAAAACGCCCGCGCGGCACGGAG
CGTTCTGACATCCGATGGAAGTTCTGAGGTCATACTGAATCATCACAGTA
TCAGCGAGCTCGATTCCAATAGCCCGCCTGTGG
UFO10263.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:17:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| lectin-24A-RA | 974 | CG3410-RA | 45..891 | 8..854 | 4235 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:17:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 3716883..3717729 | 854..8 | 4235 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 20:17:02 has no hits.
UFO10263.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-11-15 11:40:40 Download gff for
UFO10263.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| lectin-24A-RA | 45..895 | 8..860 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:46:40 Download gff for
UFO10263.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| lectin-24A-RA | 45..895 | 8..860 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:18:11 Download gff for
UFO10263.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| lectin-24A-RA | 45..895 | 8..860 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:18:11 Download gff for
UFO10263.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 3716879..3717729 | 8..860 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:46:40 Download gff for
UFO10263.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 3716879..3717729 | 8..860 | 99 | | Minus |
