UFO10265.5prime Sequence
1083 bp (1013 high quality bases) assembled on 2011-11-10
> UFO10265.5prime
CAGTCGACATGAAGTTACTGAACCTACTACTGGTCGTTCTCTTCCTAATA
GGAATGGTTGAGGCTCGAAGAAGGAAAAGAGAGGTTGAAATTTGGATACG
ACCAGAAAAGCACAATCCACCAGGAACCAGATATTGTTCACCTGAGGACC
CCATGTGTCAAAGATATGGTGATGCAAGCTTTCTAGACCATTCGTTTGGC
GCGCGGGCCCAGGTAAGTGGTCATAATCATAATCATAATCATAATCATAA
TCACAACTAGCCTAGGAGATCCTGGTCATGACTAGTGCTTGGATTCTCAC
CAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACAAATCCAGATGG
AGTTCTGAGGTCATTACTGGATCTATCAACAGGAGTCCAAGCGAGCTCGA
TATCAAATTACGCCCCGCCCTGCCACTCATCGCAGTACTGTTGTAATTCA
TTAAGCATTCTGCCGACATGGAAGCCATCACAAACGGCATGATGAACCTG
AATCGCCAGCGGCATCAGCACCTTGTCGCCTTGCGTATAATATTTGCCCA
TGGTGAAAACGGGGGCGAAGAAGTTGTCCATATTGGCCACGTTTAAATCA
AAACTGGTGAAACTCACCCAGGGATTGGCTGAGACGAAAAACATATTCTC
AATAAACCCTTTAGGGAAATAGGCCAGGTTTTCACCGTAACACGCCACAT
CTTGCGAATATATGTGTAGAAACTGCCGGAAATCGTCGTGTATTCACTCC
AGAGCGATGAAAACGTTTCAGTTTGCTCATGGAAAACGGTGTAACAAGGG
TGAACACTATCCCATATCACCAGCTCACCGTCTTTCATTGCCATACGAAA
TTCCGGATGAGCATTCATCAGCGGGCAAGAATGTGAATAAAGGCCGGATA
AACTGTGCTTATTTTTTCTTTACGGTCTTTAAAAGGCCGTATATCCAGCT
GAACGGTCTGGTTATAGGTACATTGAGCAACTGACTGAAATGCCCTCAAA
ATGTTCTTTACGATGCATGGATATATCACGGGTGTAATTTCCAGTGATTT
TTTCTCCAATTTAAGCTCATAGTCTGGAAGGAT
UFO10265.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:17:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Sfp70A4-RB | 331 | CG42480-RB | 5..169 | 9..173 | 825 | 100 | Plus |
| Sfp70A4-RA | 205 | CG42480-RA | 5..169 | 9..173 | 825 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:17:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 13296692..13296856 | 173..9 | 825 | 100 | Minus |
Blast to na_te.dros performed 2014-11-27 20:17:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| transib1 | 2167 | transib1 TRANSIB1 2167bp | 230..299 | 739..808 | 124 | 67.6 | Plus |
UFO10265.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-11-15 11:40:40 Download gff for
UFO10265.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Sfp70A4-RA | 2..177 | 7..182 | 96 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:46:44 Download gff for
UFO10265.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Sfp70A4-RA | 2..177 | 7..182 | 96 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:18:15 Download gff for
UFO10265.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Sfp70A4-RA | 2..177 | 7..182 | 96 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed on 2014-11-27 21:18:15 has no hits.
Sim4 to na_arms.dmel.RELEASE5 performed on 2013-08-04 17:46:44 has no hits.
