UFO10272.5prime Sequence
855 bp (838 high quality bases) assembled on 2011-11-10
> UFO10272.5prime
CAGTCGACATGAAGTACCTGATTGTCTGCGTTACCCTGGCCCTTTTCGCC
TACATCAACGCCAGCCCAGCGTACGGCAACCGTGGAGGTTATGGTGGTGG
CTACGGTGGTGGCTACGGTCCTGTTCAGCGCGTCGTCTACGAGGAGGTGC
CCGCCTACGGACCATCCCGTGGCTACAACAGCTATCCCCGCAGCCTGCGA
TCGGAGGGTAATGGAGGAAGTGCCGCTGCCGCTGCCGCCGCTTCCGCCGC
TGCCGTGAATCCCGGAACCTACAAGCAGTACGCCATTCCCTCCTACGAGT
TGGATGGCGCTCGCGGCTACGAGATCGGACACGGCTACGGCCAACGTGCT
TACGCAAGCTTTCTAGACCATTCGTTTGGCGCGCGGGCCCAGGTAAGTGG
TCATAATCATAATCATAATCATAATCATAATCACAACTAGCCTAGGAGAT
CCTGGTCATGACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGG
CAACCGAGCGTTCTGAACAAATCCAGATGGAGTTCTGAGGTCATTACTGG
ATCTATCAACAGGAGTCCAAGCGAGCTCGATATCAAATTACGCCCCGCCC
TGCCACTCATCGCAGTACTGTTGTAATTCATTAAGCATTCTGCCGACATG
GAAGCCATCACAAACGGCATGATGAACCTGAATCGCCAGCGGCATCAGCA
CCTTGTCGCCTTGCGTATAATATTTGCCCATGGTGAAAACGGGGGCGAAG
AAGTTGTCCATATTGGCCACGTTTAAATCAAAACTGGTGAATCCAGTGTA
CACTCAACTAAGTCGCCTGTGACACGCAATTGAGGCCCTAGACGTTGAGT
ATGGG
UFO10272.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:16:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Cp15-RA | 515 | CG6519-RA | 46..391 | 8..353 | 1730 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:16:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 8728609..8728942 | 20..353 | 1670 | 100 | Plus |
Blast to na_te.dros performed 2014-11-27 20:16:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| blood | 7410 | blood BLOOD 7410bp | 413..462 | 188..237 | 115 | 70 | Plus |
UFO10272.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-11-15 11:40:38 Download gff for
UFO10272.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cp15-RA | 39..396 | 1..361 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:46:33 Download gff for
UFO10272.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cp15-RA | 39..396 | 1..361 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:18:07 Download gff for
UFO10272.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cp15-RA | 39..396 | 1..361 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:18:07 Download gff for
UFO10272.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 8728610..8728942 | 21..353 | 100 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:46:33 Download gff for
UFO10272.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 8721710..8722042 | 21..353 | 100 | == | Plus |
