UFO10275.5prime Sequence
1097 bp (1000 high quality bases) assembled on 2011-11-10
> UFO10275.5prime
CAGTCGACATGGCAGCCGACGGCAGTTGGCCTATACTACTCTTGTTGGTC
TCAACACAGGCCATTATTCACGCTGAGAATCTAAGTGAATCCACGCCCGG
CCCCGATGAGGAATACAATGTGAGCACAACTCCGGGTGCGCCGCTGGAAG
AGACCACCAATCGCTTGGCTGCTCGCGTTGAGCCATACGATAAGGGTGAT
CGGGAGCAGTACGATGTGATCGATGTGGCCACAGCTACCGGTACGGTGAT
GGGCAAGCCCAGAAGTGGACAGACCACGAGAATCTACACCACCGGCGAAG
TGGACGAAAGCTTTTGGCTAAAGCATCTTGGCGATGACTTCAAACATGCC
ATCCATCTGCAGGTGGGCGGCACCAACGAAGAGTACAATCGCCTGATTAA
CCGGACCCAGAACGGTGTCCACGAGGAGGTGCATCACGAGTATTTACCGG
GGGCCGAACGACCTGGCAGCGCAGTCCAGCCTCCGTCTCCTCTACCTGCG
CCACACCAATCGCGTCCAGCTTATCGTCAGGGTTTCGACAATCGAGCCAT
GGCCATGAAACAGCAGTATCTCATCCATCAGCAGACCCAGCAATCGCATC
CTGCCCAGCAACGCTATAACTATGCCCAACAGCATGCACAACACTATGCA
CCACAACCACAACTGCAACCGCAACCACAACCACAACCACAATACCCACA
GCACACACCGCACAGAAACACGTATGCAATGCCTCAGAATTATGGGCAGC
AGAACTACAAGCCGCAGAGTTATATTATCAACTCTAGCGAAGATCAGCTG
CACGCCGAGCAATCGAATCCCTCGCCAATGAAATCAGCTGGAGAGGATCG
ACAACATCACGAGGAGGAGTTTGACTCCTTTGGCGGTCAGCTCAACTTCA
AATCACCCTTCAATGACTACGGCAGTCGACCAGCACGAGATCTCACCTAC
CTTCTTTTATAAGGCGGGGGTCTTGCAGGCTTCCTAGACCATTCGGTTGG
CCGCCCCGGCCCCAGGGTAGGTGGTCATAATTCATTATCATAATCATATC
ACAAATTCACACCTAGCCTAGGAGATCCCTGGTATAGACTATGGCTT
UFO10275.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:18:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Cp7Fc-RA | 1132 | CG15351-RA | 3..969 | 1..969 | 4750 | 99.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:18:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 8477266..8478147 | 76..957 | 4380 | 99.8 | Plus |
| X | 23542271 | X | 8477119..8477195 | 1..77 | 370 | 98.7 | Plus |
Blast to na_te.dros performed on 2014-11-27 20:18:06 has no hits.
UFO10275.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-11-15 11:40:45 Download gff for
UFO10275.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cp7Fc-RA | 3..972 | 1..973 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:47:08 Download gff for
UFO10275.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cp7Fc-RA | 3..972 | 1..973 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:18:37 Download gff for
UFO10275.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cp7Fc-RA | 3..972 | 1..973 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:18:37 Download gff for
UFO10275.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 8477119..8477195 | 1..77 | 98 | -> | Plus |
| X | 8477268..8478147 | 78..957 | 99 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:47:08 Download gff for
UFO10275.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 8371152..8371228 | 1..77 | 98 | -> | Plus |
| arm_X | 8371301..8372180 | 78..957 | 99 | == | Plus |
