UFO10277.5prime Sequence
1100 bp (1006 high quality bases) assembled on 2011-11-10
> UFO10277.5prime
CAGTCGACATGCCGTACTACGAGGAGGAACGTCGTCATCACCATCATCAC
CATCACGGTGGAAGGCCAATTGTAGAGGTGGACATTGTGCCGCCAAGGAT
TCCTCGACCAGTGATTGAGATCGGAGTGGGCGGCCGGTATCCACCACCAC
CGCCCAGGGTGGAGGTCATCACACCAGCTGCCGTCTACCAGCCGCCACCA
CCACGACCCATTATCGAGGTGGATGTGGTGCCACCAAGAGCTCCCTTCAT
CGAGTTCAACATCGGCGGTCGGCGTCCACCTCCCAGGGAAGAGGTCATCA
TCGTTCAGCAACCCCCACCGCCCAGGTGGGCAAGCTTTCTAGACCATTCG
TTTGGCGCGCGGGCCCAGGTAAGTGGTCATAATCATAATCATAATCATAA
TCATAATCACAACTAGCCTAGGAGATCCTGGTCATGACTAGTGCTTGGAT
TCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACAAATCC
AGATGGAGTTCTGAGGTCATTACTGGATCTATCAACAGGAGTCCAAGCGA
GCTCGATATCAAATTACGCCCCGCCCTGCCACTCATCGCAGTACTGTTGT
AATTCATTAAGCATTCTGCCGACATGGAAGCCATCACAAACGGCATGATG
AACCTGAATCGCCAGCGGCATCAGCACCTTGTCGCCTTGCGTATAATATT
TGCCCATGGTGAAAACGGGGGCGAAGAAGTTGTCCATATTGGCCACGTTT
AAATCAAAACTGGTGAAACTCACCCAGGGATTGGCTGAGACGAAAAACAT
ATTCTCAATAAACCCTTTAGGGAAATAGGCCAGGTTTTCACCGTAACACG
CCACATCTTGCGAATATATGTGTAGAAACTGCCCGGAATCGTCGTGGTAT
TCACTTCAGAGCGATGAAAACGTTTCAGTTTGCTCATGGAAACGTGTAAC
AAGGGTGACACTATCCCATATCACAGCTCACCGTCTTTCATTGCCATACG
AATTTCCGGATGAGCATCATCAGGCGGCCAGATGTCAATTAAGGCCGGGA
TAACCTGTGCCTATTTTCCTACCGACTTTATAGCGTAATATCAGCTGGAA
UFO10277.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:18:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15423-RA | 566 | CG15423-RA | 73..393 | 9..329 | 1590 | 99.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:18:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 4006113..4006433 | 9..329 | 1590 | 99.7 | Plus |
Blast to na_te.dros performed on 2014-11-27 20:18:28 has no hits.
UFO10277.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-11-15 11:40:46 Download gff for
UFO10277.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15423-RA | 68..398 | 2..335 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:47:17 Download gff for
UFO10277.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15423-RA | 68..398 | 2..335 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:18:44 Download gff for
UFO10277.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15423-RA | 68..398 | 2..335 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:18:44 Download gff for
UFO10277.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 4006108..4006433 | 2..329 | 98 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:47:17 Download gff for
UFO10277.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 4006108..4006433 | 2..329 | 98 | == | Plus |
