UFO10281.5prime Sequence
1089 bp (987 high quality bases) assembled on 2011-11-10
> UFO10281.5prime
CAGTCGACATGCAGTCTTCGCCGAAACTCGCACTGGCACTGACCTTAGTG
CTGATTTGGTGCCTGGCCCAAAGTCATGTGGAATCCAGAAGATGGCGAAA
GTCCGTGCAACTGAAACTGCACAGGGAAACGAACCACACCAAAATACTGA
GCAGTTTCCACAACCAGAAGCTTAGACTCAAGGAAAAACTGAGCCCGACC
AGCGATTTGGCGATATCCTCGGTATCTGTATATCAAACAACCGTGTCAAA
AGAGAACCTGATCAATTCCCACAACACCGAGTACTATGTTACGGCCGGTT
TCGGGACGCCCAAGTCGCAGCCAGTCACTCTTCTGGTGGACACCGCCTCG
GCGAATCTGCTGGTCTACTCCTCGGAGTTTGTGAAACAGTCCTGTTTGCA
CCACGATGGCTACAATTCCAGTGAGTCGCAAACGTATCAGGCCAATGGAT
CGCCCTTTCAGATACAGTTCGCATCGCAGGAAATTCTGACAGGAATCCTC
TCCACGGACACTTTCACCTTAGGAGATCTGGTCATTAAGAATCAGACCTT
TGCCGAAATAAACTCGGCGCCTACGGATATGTGTAAACGATCGAATTTCG
ATGGCATCATTGGTCTGGGATTCTCCGAAATCGCCCTGAATGGAGTGGAG
ACCCCTCTGGACAATATTTTGGAACAGGGACTCATCGACGAACCCATCTT
CTCCCTGTACGTCAACCGGAACGCCTCGGATGCCAGTAATGGTGGCGTAT
TGCTGCTCGGAGGATCAGATCCCACTCTTTACAGCGGATGCCTGACATAC
GTGCCAGTTTCCAAAGTGGGTTTTTGGCAGATCACCGTGGGCCAAGTTGA
GATTGGTCCAAGAAGCTGTGCTCCAACTGCCAGGCCATCTTCGATATGGG
AACCTCCTTGATATTGTGCCGTGCCCTGCTCTGAAATCATAAACAGAACT
GGGCATTAAGAACCGATAGAAGACGTGTCTATATCATGACTGCAGAGTGT
CTCATTGCCCAGATCGTCTTAAATGATGAGACTCACCTCACGTCGACTAT
CCCACTAATGGACTGCTCAGTTCAGTCTCCGACTGCAAT
UFO10281.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:18:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31928-RB | 1565 | CG31928-RB | 20..1051 | 9..1024 | 4775 | 98.4 | Plus |
| CG31928-RA | 1351 | CG31928-RA | 20..1051 | 9..1024 | 4775 | 98.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:18:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 1492314..1493270 | 9..960 | 4555 | 99.4 | Plus |
Blast to na_te.dros performed on 2014-11-27 20:18:43 has no hits.
UFO10281.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-11-15 11:40:47 Download gff for
UFO10281.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31928-RA | 12..1008 | 1..987 | 98 | == | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:47:23 Download gff for
UFO10281.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31928-RA | 12..1008 | 1..987 | 98 | == | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:18:48 Download gff for
UFO10281.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31928-RA | 12..1008 | 1..987 | 98 | == | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:18:48 Download gff for
UFO10281.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 1492306..1493302 | 1..987 | 98 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:47:23 Download gff for
UFO10281.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 1492306..1493302 | 1..987 | 98 | == | Plus |
