UFO10285.5prime Sequence
1076 bp (915 high quality bases) assembled on 2011-11-10
> UFO10285.5prime
CAGTCGACATGAAATACTTTGTGGTCCTTGTCGTCCTGGCCCTCATTTTG
GCCATCAGCGTGGGTCCTTCGGATGCAGTATTTATTGATATTCTTGACAA
AGTGGAAAACGCAATACACAATGCTGCTCAAGTGGGAATTGGCTTTGCTA
AGCCCTTTGAAAAATTGATCAATCCGAAGGCAAGCTTTCTAGACCATTCG
TTTGGCGCGCGGGCCCAGGTAAGTGGTCATAATCATAATCATAATCATAA
TCATAATCACAACTAGCCTAGGAGATCCTGGTCATGACTAGTGCTTGGAT
TCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACAAATCC
AGATGGAGTTCTGAGGTCATTACTGGATCTATCAACAGGAGTCCAAGCGA
GCTCGATATCAAATTACGCCCCGCCCTGCCACTCATCGCAGTACTGTTGT
AATTCATTAAGCATTCTGCCGACATGGAAGCCATCACAAACGGCATGATG
AACCTGAATCGCCAGCGGCATCAGCACCTTGTCGCCTTGCGTATAATATT
TGCCCATGGTGAAAACGGGGGCGAAGAAGTTGTCCATATTGGCCACGTTT
AAATCAAAACTGGTGAAACTCACCCAGGGATTGGCTGAGACGAAAAACAT
ATTCTCAATAAACCCTTTAGGGAAATAGGCCAGGTTTTCACCGTAACACG
CCACATCTTGCGAATATATGTGTAGAAACTGCCGGAAATCGTCGTGGTAT
TCACTCCTGAGCGATGAAAACGTTCAGTTTGCTCATGGAAACGTGTACAA
GGTGACACTATCCATATCACAGCTCACGTCTTTCATGCATACGAATTCGA
TGAGCATCATCAGCGGCAGATGTGATAAGCCGATAAACTTGTGCTATTTT
CTTACGTCTTAAAGCGATATCAGCTGACGTCTGTAAGTACTGGCACTGAC
TGATGCTCAATTTCTACATGCATGGATATCACGTGTACATGATTTCCATA
CTCTAGCGAATCATCGACATACAGTAATCATTGACTACGTTGCAGGACTA
GTAAAAAGTCGATCAGCAGTCGACAT
UFO10285.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:19:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Anp-RB | 373 | CG1361-RB | 38..208 | 9..179 | 855 | 100 | Plus |
| Anp-RA | 272 | CG1361-RA | 38..208 | 9..179 | 855 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:19:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 30209985..30210081 | 9..105 | 485 | 100 | Plus |
| 3R | 32079331 | 3R | 30210142..30210217 | 104..179 | 380 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 20:19:19 has no hits.
UFO10285.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-11-15 11:40:50 Download gff for
UFO10285.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Anp-RA | 38..213 | 9..187 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:47:36 Download gff for
UFO10285.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Anp-RA | 38..213 | 9..187 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:19:01 Download gff for
UFO10285.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Anp-RA | 38..213 | 9..187 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:19:01 Download gff for
UFO10285.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 30209985..30210080 | 9..104 | 100 | -> | Plus |
| 3R | 30210143..30210217 | 105..179 | 100 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:47:36 Download gff for
UFO10285.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 26035707..26035802 | 9..104 | 100 | -> | Plus |
| arm_3R | 26035865..26035939 | 105..179 | 100 | == | Plus |
