UFO10286.5prime Sequence
1097 bp (926 high quality bases) assembled on 2011-11-10
> UFO10286.5prime
CAGTCGACATGCTCCAGAATTTCGCGTTTGAGAATCACCCCACAATCGGA
TTCTTTTCCAAGCAATCGGAGCTAATGAGAATGCTGCCCGAGATTCCCAA
GCTGCGCAACATCTTCGATCTGTTCGTGGTCAATGAATGTGACCAGGCGG
CTGGCGGAGAAGATGTGGCGGCCCCAACATGCTTGGATCTTGGCATCGGG
ATACGGATGACGGATGTGGCGGACTGCCTGCGCATCATGGGCCTGAATCC
CAGTGACGACGAGCTGCAGCAGCGACTGGAGGAGCATGTGCGTCGACGCG
AGTCGTTGGGCATGGGAATGAAGAAGATCGCACAGCGCGCCACCTTTGAG
CTGGTGCTCACGCTGTACTGCCAGCTGGCGGAGCAGGAGGTGAAGGAGAT
GGCCAAGGGATGCATCGTCGAGAATGTGCTGCGCGTGTTGCGTAGCCGCG
ATTCCGCGGGCACTGGCATGTTGCCCTACAGTCAGCTGCGCCATTTGCTG
ACCACCATGGGCAATCGATTGGACGAGACGGAGGTCTACGGCGTGCTCCA
TCGCGCTGCGGACATTAATGGCAATGTCCTCTACGAGCACCTAGTACACC
AGCTGTTCGCCACGGATCCGCTGGCCGAGGAGCGGCTGCAACAGGCGCAG
CTTTACCTGCAGGCCGTCGGACGCAATGCCATCGACATGGACATGGATAA
GCGGGACGAGTTCATCGATGCCATCCGGCGGGCGGATCCCGCGCGCTCCG
ATTTCATTGAGCCCGCAGCGCCTGCTCGAGCTGCTCATCGCAATGGGGGA
GCAGTTCACCGGCGAGGAGCTGCAGCTGCTCATCCAGGGAATGGAGGATA
CCACGGTGCAAGCGGGGCATTCAACTATTGTCGCCTTCCTGGAGTTCATT
ATGAACGAGGCCAAGCTTTTCTAGACCATTCCGTTTGGCGCGCGGGCCCA
GGGTAAGTGGTCCATAATCATAACTCATATCCATAATCCATATCACCACC
TAGTGCTTAGGAGATTCTGGGTCATGACCTAGGGGCTTGGAATTCCTCAC
CATTAAAAAACCGCCCCGCGGTCCACCCGAACGTTCTGGACCATTCC
UFO10286.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:19:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG34435-RA | 1084 | CG34435-RA | 73..969 | 9..909 | 4345 | 99.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:19:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 5613440..5614174 | 909..171 | 3385 | 99.1 | Minus |
| X | 23542271 | X | 5614233..5614395 | 171..9 | 815 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 20:19:27 has no hits.
UFO10286.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-11-15 11:40:51 Download gff for
UFO10286.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34435-RA | 1..900 | 9..910 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:47:40 Download gff for
UFO10286.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34435-RA | 64..969 | 1..909 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:19:04 Download gff for
UFO10286.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34435-RA | 64..969 | 1..909 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:19:04 Download gff for
UFO10286.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 5613440..5614173 | 172..909 | 99 | <- | Minus |
| X | 5614233..5614404 | 1..171 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:47:40 Download gff for
UFO10286.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 5507473..5508206 | 172..909 | 99 | <- | Minus |
| arm_X | 5508266..5508437 | 1..171 | 98 | | Minus |
