UFO10294.5prime Sequence
1075 bp (953 high quality bases) assembled on 2011-11-10
> UFO10294.5prime
CAGTCGACATGGAGACGAAGTTCGTGGTCATAACTTTTCTAATAAGCTAC
GTACTTGCCCAATCGAATGCCGATTGTGGCAATAAGCCAATTGTGGATGG
AAATTGCGATCAGATAATCAAAGGATTTACTTTTGCAACCGAAGAAAACC
GATGCAAAAAGTTTAGAGCAAAGGGTTGCACAGTGGGCGGAAATTACTTT
CGAGCCAAAGATGAGTGCGAGCTCAAATGCAAGGGTTATATAAATTGGGG
TATCGAAAGCTTCGGAAACGGAGATTGGGAAGAAAGTGAAATTGAGGACT
ATTGGAATAATGGTTCGGAAGAAAGCGAAGTCGAAAGCATCTCGAATAGA
GGATCGAAAAAACGAACTCTCGCAAGCTTTCTAGACCATTCGTTTGGCGC
GCGGGCCCAGGTAAGTGGTCATAATCATAATCATAATCATAATCATAATC
ACAACTAGCCTAGGAGATCCTGGTCATGACTAGTGCTTGGATTCTCACCA
ATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACAAATCCAGATGGAG
TTCTGAGGTCATTACTGGATCTATCAACAGGAGTCCAAGCGAGCTCGATA
TCAAATTACGCCCCGCCCTGCCACTCATCGCAGTACTGTTGTAATTCATT
AAGCATTCTGCCGACATGGAAGCCATCACAAACGGCATGATGAACCTGAA
TCGCCAGCGGCATCAGCACCTTGTCGCCTTGCGTATAATATTTGCCCATG
GTGAAAACGGGGGCGAAGAAGTTGTCCATATTGGCCACGTTTAAATCAAA
ACTGGTGAAACTCACCCAGGGATTGGCTGAGACGAAAAACATATTCTCAA
TAAACCCTTTAGGGAAATATGCCAGTTTTCACCGTACACGCCACATCTTG
CGAATATATGTGTAGAACTGCCGGAAATCGTCGTGTATTCACTTCAGAGC
GATGAACGTTCAGTTTGCTCATGAAACGCTGTACAGTGACACTATCCATT
ATCACAGCTCACGTCTTTCATGCATACGAATCCGGATGACCATCATCAGG
GGCAGGATGTGAATTAGCCGATAAA
UFO10294.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:18:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Sfp24Ba-RA | 522 | CG42461-RA | 21..383 | 9..371 | 1815 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:18:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 3668116..3668418 | 371..69 | 1515 | 100 | Minus |
| 2L | 23513712 | 2L | 3668471..3668531 | 69..9 | 305 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 20:18:52 has no hits.
UFO10294.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-11-15 11:40:48 Download gff for
UFO10294.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Sfp24Ba-RA | 16..386 | 1..375 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:47:26 Download gff for
UFO10294.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Sfp24Ba-RA | 16..386 | 1..375 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:18:52 Download gff for
UFO10294.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Sfp24Ba-RA | 16..386 | 1..375 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:18:52 Download gff for
UFO10294.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 3668117..3668417 | 70..370 | 100 | <- | Minus |
| 2L | 3668471..3668535 | 1..69 | 94 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:47:26 Download gff for
UFO10294.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 3668117..3668417 | 70..370 | 100 | <- | Minus |
| arm_2L | 3668471..3668535 | 1..69 | 94 | | Minus |
