UFO10296.5prime Sequence
991 bp (764 high quality bases) assembled on 2011-11-10
> UFO10296.5prime
CAGTCGACATGTGCTCTAGTTTAAGCGACTTGTTTGCCTGTATCAGGGCC
CAGGGAAATTCCGACACGGATTCCACCAGCACCACCCATCGGCGGAATAT
CGCTGACCTGGACGATGAGGCGCCCGATCTGCAGCTCCAACAGGAGCAGA
CCCGCAAGTGGAACGATCTTTCTATGCCACAGCGACACGATTCGTTTCCA
GTTCCTCCTCCTTCAGCTGGATCTCCATCAACGGGCTACCTTCGTCCCTC
ATTGCGGTCAGCACGGGTCTCCTACGAAGCCTTGGAGCGCTACGATCGAA
TTTTTGGCAGATCTTTCCAAGACGCCGGGTCATCTGGTTCAGTTCGAAAT
ATTCCCGACCAGTTCGCAAGCTTTCTAGACCATTCGTTTGGCGCGCGGGC
CCAGGTAAGTGGTCATAATCATAATCATAATCATAATCATAATCACAACT
AGCCTAGGAGATCCTGGTCATGACTAGTGCTTGGATTCTCACCAATAAAA
AACGCCCGGCGGCAACCGAGCGTTCTGAACAAATCCAGATGGAGTTCTGA
GGTCATTACTGGATCTATCAACAGGAGTCCAAGCGAGCTCGATATCAAAT
TACGCCCCGCCCTGCCACTCATCGCAGTACCGGTTGTAAATCATTAAGCA
TTCTGCCGACATGGAAGCCATCACAAACGGCATGATGAAACTGAATTCGC
CAGGGCATCCAGCACTGTGTCGTCGTGCATATATATTTTGCCCATGATGA
AAACGGGGGCGAAGAGGTTGTCCATATTGGCCACGTTTAAATCAAACTGG
TGAAACTCACCCAGGGATTGGCTGAGACGAAAAACCTTATTCTCAATAAC
TGTTTAAGGGAATAGGCCAGTTTTCCCCGTAACACGGCCACATCTTGCGA
TTAATGTGTAAAAACCTGCCCGGAATCGTCGTGTATTCATCCAGAGCGAT
GAACGTTCAGTTTGCTCATGAAAACGGTGTACAGGTGAACC
UFO10296.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:19:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14635-RA | 475 | CG14635-RA | 15..371 | 9..365 | 1785 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:19:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 844837..845193 | 9..365 | 1785 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 20:19:09 has no hits.
UFO10296.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-11-15 11:40:49 Download gff for
UFO10296.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14635-RA | 1..360 | 9..366 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:47:34 Download gff for
UFO10296.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14635-RA | 15..376 | 9..371 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:18:57 Download gff for
UFO10296.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14635-RA | 15..376 | 9..371 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:18:57 Download gff for
UFO10296.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 844837..845193 | 9..365 | 100 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:47:34 Download gff for
UFO10296.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 738870..739226 | 9..365 | 100 | == | Plus |
