UFO10301.5prime Sequence
1117 bp (955 high quality bases) assembled on 2011-12-08
> UFO10301.5prime
CAGTCGACATGGCGAACTATTACTATTTCGACATCAAACTTAAACTTCGG
GATCCGACTGCAGTTGCTTTGACCCCATCTCTGTTTCGAAGCTGCGTTCT
TGACGCCCTGGACAGTTTCTTCTGCGAGGAGAAACCCACACTGGAGATCG
TGAAGTTCTGCGCCCAGCAACATCGTGTTATCTTTCGAGTGCCAGAGCAA
CTGCACGACATGACCCGCATATCCATTGAGCTCATCGGTCACTACCAGCA
GATACCCTGTCATTTTGAGATCTTGGAAACATCCAAATCATCGCTGGACT
TTGAGAAGAGCATTGAAAAGACTGTCGCGGTTGTGTCCGATGATGCAAGC
TTTCTAGACCATTCGTTTGGCGCGCGGGCCCAGGTAAGTGGTCATAATCA
TAATCATAATCATAATCATAATCACAACTAGCCTAGGAGATCCTGGTCAT
GACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGC
GTTCTGAACAAATCCAGATGGAGTTCTGAGGTCATTACTGGATCTATCAA
CAGGAGTCCAAGCGAGCTCGATATCAAATTACGCCCCGCCCTGCCACTCA
TCGCAGTACTGTTGTAATTCATTAAGCATTCTGCCGACATGGAAGCCATC
ACAAACGGCATGATGAACCTGAATCGCCAGCGGCATCAGCACCTTGTCGC
CTTGCGTATAATATTTGCCCATGGTGAAAACGGGGGCGAAGAAGTTGTCC
ATATTGGCCACGTTTAAATCAAAACTGGTGAAACTCACCCAGGGATTGGC
TGAGACGAAAAACATATTCTCAATAACCCTTTAGGGAAATAGGCCAGGTT
TTCACCGTAACACGCCACATCTTGCGAATATATGTGTAGAAACTGCCGGA
AATCGTCGTTGTATTCACTCCAGAGCGATGAAATCGTTTCAGTTTGCTCA
TGGAAACCGGTGTAACAAGGGTGAACACTATTCCAATATCACCAGCTCAC
GTCTTCATTGCATACGAAATTCCCGGATGAGCATTCCATCAGGCGGTCAG
ATTGGTGGAATAAGGGCCGGATAAAACTGGGGCTATTTCTTTACGGGTCT
TTAAAGGCCGTAATATC
UFO10301.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:29:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15526-RA | 566 | CG15526-RA | 179..515 | 8..344 | 1685 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:29:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 30056249..30056552 | 41..344 | 1520 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 00:29:34 has no hits.
UFO10301.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-12-08 11:28:16 Download gff for
UFO10301.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15526-RA | 1..339 | 9..345 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:23:43 Download gff for
UFO10301.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15526-RA | 170..515 | 1..344 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:08:10 Download gff for
UFO10301.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15526-RA | 170..515 | 1..344 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed on 2014-11-27 01:08:10 has no hits.
Sim4 to na_arms.dmel.RELEASE5 performed on 2013-08-04 16:23:43 has no hits.
