UFO10310.5prime Sequence
1070 bp (942 high quality bases) assembled on 2011-12-08
> UFO10310.5prime
CAGTCGACATGAGAGTCAGGTGGAACCATTTCAAGTTATTGCTGTTTTGG
CTAACGGTTTTAGCTGTCTTGGCCTTTGAAGCCGAGGCCAGGAAGCGTGT
TAGGATTGGATTGCACAAGAATCCTGAACCAATTGAGGAGAACATAAAGA
ACGAATTGAAGACCCTTTCCATTAAACACAATTTAAATGTTGATGATACA
AAAGCTAAAACGAAAACAGATACCAAGGTCCCAGGATCAAAAGTCGCAAC
GCTAGAAAATCTATACAACACGGAGTACTACACCACATTAGGATTCGGAA
ATCCGCCGCAGGATTTGAAAGTGCTGATCGACACTGGTTCGGCGAATCTC
TGGGTGCTGTCATCCAAGTGTCCAGACTCGGTTGCACCCTGTGCCAATCG
CATAAAGTACAACTCAAGTGCTTCCACAACCTACAGGGCTATCAATACCG
CATTCAATATTGCATACGGTTCCAATTCAGAGGAAGGACCTATTGCACTC
TCCGGCTTTCAGTCCCAGGACACAGTAAACTTCGCCGGATACTCCATTAA
AAATCAGATCTTCGCCGAAAATCACCAATGCACCAGAGACCGCATTTCTG
AAGTCCCAGCTCGATGGAATTTTGGGATTGGGGTTCGCCAGCATAGCCAT
TAATAGTATTACCCCACCCTTCTACAACTTAATGGCCCAAGGTCTAGTAA
ACCGATCTGTGTTTTTCGATCTACTTGAATAGAAATGGCACCAATGCCAT
TAACGGTGGGGAGCTGATCCTGGGAGGATCGGATTCCGGGTCTGTACAGC
GGGGTGTTTGACCTATGTGCCAGTTTCCAGCGCAGGATACTGGCAGTTTA
CATGACTAGTTCCCAATCTGAATTGGATTTTCAGTTTTTGGTGAGAACTG
CCAGGCCATACTTCGATGTACGCACCTTTCCTTATTGTTGTGCCTGGACC
AAGCTCTAAATTACCATCAACCAATATTTGGGGAGTTCTCAACCCGACGG
CCTTCGAAATGAAGTCTTTTTTAAGTGGATTGCTCCTCGAATCGGCGATC
CTCTGAACCTTTGTTCCCCG
UFO10310.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:30:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31926-RB | 1612 | CG31926-RB | 287..1311 | 8..1050 | 4560 | 96.9 | Plus |
| CG31926-RA | 1343 | CG31926-RA | 18..1042 | 8..1050 | 4560 | 96.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:30:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 1495746..1496761 | 8..1040 | 4115 | 96.8 | Plus |
Blast to na_te.dros performed on 2014-11-27 00:30:29 has no hits.
UFO10310.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-12-08 11:28:21 Download gff for
UFO10310.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31926-RA | 1..1035 | 9..1061 | 96 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:24:17 Download gff for
UFO10310.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31926-RA | 13..1053 | 1..1061 | 96 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:08:35 Download gff for
UFO10310.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31926-RA | 13..1053 | 1..1061 | 96 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 01:08:35 Download gff for
UFO10310.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 1495741..1496781 | 1..1061 | 96 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:24:17 Download gff for
UFO10310.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 1495741..1496781 | 1..1061 | 96 | | Plus |
