Clone UFO10311 Report

Search the DGRC for UFO10311

Clone and Library Details

Library:UFO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2008-06-20
Comments:BD Creator expression clones with C-terminus FLAG HA tag for transgenic expression using PhiC31 integrase system
Original Plate Number:103
Well:11
Vector:pUAST-CFLAGHA-BD-PHI
Associated Gene/TranscriptCG12517-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

UFO10311.5prime Sequence

719 bp (718 high quality bases) assembled on 2011-12-08

> UFO10311.5prime
CAGTCGACATGAGTAACCTGGGATCAATACTGCTCCTTCTGCTCATCATC
TGTATCGAACGCTCGCGACAGCAACGCTTCTCGCATCCCGAATCCTGGAC
GGATAATGGGATTTACGTTCCCGGTTCGGAGGACGACCTGGACTGGACGG
GCGCCAATTGGCAGCTGGTGGTCCGCTTTCTGATGCAGCGCCAGCAGCTG
CGTTTCTGCATCGCACTGGCCAGATTCGATGAGCAATTGGTGCCCGGCAC
AGCCTGCCAGGCTCTTTTGGCCAACGGCCCGCTTATGGCCAACTGCGATA
TTGGCAACATCGAGGATCTGACCATGACCTTGCGCTATGCCTTCGGCGAA
ATTCTGCTGGACACAAGTCGAAAATGCCGTCCTGGCTTGGAGCTATTCGG
AGTTCGCTGCAGGCGGAGGGCAGCAAGCTTTCTAGACCATTCGTTTGGCG
CGCGGGCCCAGGTAAGTGGTCATAATCATAATCATAATCATAATCATAAT
CACAACTAGCCTAGGAGATCCTGGTCATGACTAGTGCTTGGATTCTCACC
AATAAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACAAATCCAGATGG
GAGTTCTGAGGTCATTACTGGATCTATCACAGGAGTCCAAGCGAGCTCGA
TATCAAATTACGCCCCGCCCTGCCACTCCATCGCAGTACTGTTGTAATTC
ATTAAGCATTCTGCCGACA

UFO10311.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:30:35
Subject Length Description Subject Range Query Range Score Percent Strand
CG12517-RA 556 CG12517-RA 74..487 9..422 2070 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:30:32
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 10870240..10870653 9..422 2070 100 Plus
Blast to na_te.dros performed on 2014-11-27 00:30:33 has no hits.

UFO10311.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-12-08 11:28:22 Download gff for UFO10311.5prime
Subject Subject Range Query Range Percent Splice Strand
CG12517-RA 68..493 1..429 98   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:24:19 Download gff for UFO10311.5prime
Subject Subject Range Query Range Percent Splice Strand
CG12517-RA 68..493 1..429 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:08:37 Download gff for UFO10311.5prime
Subject Subject Range Query Range Percent Splice Strand
CG12517-RA 68..493 1..429 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 01:08:37 Download gff for UFO10311.5prime
Subject Subject Range Query Range Percent Splice Strand
2L 10870234..10870659 1..429 98 == Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:24:19 Download gff for UFO10311.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 10870234..10870659 1..429 98 == Plus