UFO10322.5prime Sequence
1093 bp (991 high quality bases) assembled on 2011-12-08
> UFO10322.5prime
CAGTCGACATGAAGGTTCAGCTCGCTCTAACCTCCCTACTAGTGATTTCT
TTTGGCATTGCCCTCGCCTATGATGGTGACGGACAGCCGGGTTGCAAGAC
CCAAGCCGAGCTAGACATTGTAGTTTTCCGCAACAATTGGGATGCCACAT
CGTATTGGAAGTGTGAGACACTTAACAAACCAGCCATTGAAATCAAGTGC
CCCAGCGAAACAGGATTCATGGATAGTCTCAAGAACTGCGTCAACTGGGA
GGAATGGGAATGGGAGAAACCAGTGGAGCCCCTTAGCGAAGCGGATCAGG
CAAGCTTTCTAGACCATTCGTTTGGCGCGCGGGCCCAGGTAAGTGGTCAT
AATCATAATCATAATCATAATCATAATCACAACTAGCCTAGGAGATCCTG
GTCATGACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAAC
CGAGCGTTCTGAACAAATCCAGATGGAGTTCTGAGGTCATTACTGGATCT
ATCAACAGGAGTCCAAGCGAGCTCGATATCAAATTACGCCCCGCCCTGCC
ACTCATCGCAGTACTGTTGTAATTCATTAAGCATTCTGCCGACATGGAAG
CCATCACAAACGGCATGATGAACCTGAATCGCCAGCGGCATCAGCACCTT
GTCGCCTTGCGTATAATATTTGCCCATGGTGAAAACGGGGGCGAAGAAGT
TGTCCATATTGGCCACGTTTAAATCAAAACTGGTGAAACTCACCCAGGGA
TTGGCTGAGACGAAAAACATATTCTCAATAAACCCTTTAGGGAAATAGGC
CAGGTTTTCACCGTAACACGCCACATCTTGCGAATATATGTGTAGAAACT
GCCGGAAATCGTCGTGTATTCACTCCAGAGCGATGAAAACGTTTCAGTTT
GCTCATGAAAACGTGTAACAAGGTGAACACTATCCCATATCACAGCTCAC
GTCTTTCATGCATACGAAATTCAGATGAGCATTCATCAGCGGCAGAATGT
GAATAAAGGCGAATAAACTTGTGCTATTTTTCTACGTCTTAAAAGCGTAA
TATCAGCTGAACCGCGCTTAAGTACTGACCACTTGACTGAATG
UFO10322.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:31:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14645-RA | 409 | CG14645-RA | 20..310 | 9..299 | 1455 | 100 | Plus |
| Skp2-RA | 2412 | CG9772-RA | 1884..2174 | 299..9 | 1455 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:31:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 4335117..4335407 | 9..299 | 1455 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 00:31:42 has no hits.
UFO10322.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-12-08 11:28:27 Download gff for
UFO10322.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14645-RA | 1..291 | 9..299 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:24:53 Download gff for
UFO10322.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Skp2-RA | 1896..2186 | 9..299 | 100 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:09:06 Download gff for
UFO10322.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Skp2-RA | 1884..2174 | 9..299 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed on 2014-11-27 01:09:06 has no hits.
Sim4 to na_arms.dmel.RELEASE5 performed on 2013-08-04 16:24:53 has no hits.
