UFO10325.5prime Sequence
1047 bp (954 high quality bases) assembled on 2011-12-08
> UFO10325.5prime
CAGTCGACATGAAGTTGACAAAGTTATGGTTGCTTTTTGTGTGCCTGGGG
CTTTTCGTTACCCTGGTTGTGAGTGCCGATACGGACTCGGATGCCGATTC
GGATTCATCCGCCGATTCGGATTCATCCGCCGATTCCGATGAGAATACAA
CCGCATCCGGATCGATAGTAACCTCAACCACGGAGTCCAGTGCCACGAAC
AGTTCCGGTTCCTCAGATGATGCTTCTGGCAGTAGTTCCGATGTGGACGA
TGGTTCCGATGATGATACTGATTCTGGATCCGATACGGATTATGATACAC
CTACTACAGCTCCAGTTGTTAAAAAGAGGGCCAATAGGAAGAAGGCTAAC
AATAACAAGAAGAGAGCTAGCAACAATAGGAAGAAGGCCAACAATAACAA
CAACAACAAGAAGAGGGCCAACAGCAACAACAATCGCAAAAGGAGGGCGT
CCAACAACAACAATAAAAAGAAGGCATCCAACAACAACAACAGGCGCAGG
AACAACAATTCCAGGAGGCGTGGTGCAAGCTTTCTAGACCATTCGTTTGG
CGCGCGGGCCCAGGTAAGTGGTCATAATCATAATCATAATCATAATCATA
ATCACAACTAGCCTAGGAGATCCTGGTCATGACTAGTGCTTGGATTCTCA
CCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACAAATCCAGATG
GAGTTCTGAGGTCATTACTGGATCTATCAACAGGAGTCCAAGCGAGCTCG
ATATCAAATTACGCCCCGCCCTGCCACTCATCGCAGTACTGTTGTAATTT
CATTAAGCATTCTGCCGACATGGAAGCCATCACAACGGCATGATGAAACC
TGAATCGCCAGCGGCATCAGCACCTTGTCGCCTTGCGTATATATTTTGCC
CATGGTGAAACGGGGGCGAAGAAGTTGTCATATGGCCACGTTTAAATTCA
AACTGTGAAACTCACCAGGATTGGCTGAGACGAAAAACTAATTCTCATAA
TCTTTAGGAATAGTAGCTTTCACGTACCGCCCAATCTTGCGATATAT
UFO10325.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:31:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Pig1-RB | 690 | CG10790-RB | 51..572 | 3..524 | 2595 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:31:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 3248718..3249239 | 524..3 | 2595 | 99.8 | Minus |
Blast to na_te.dros performed on 2014-11-27 00:31:48 has no hits.
UFO10325.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-12-08 11:28:28 Download gff for
UFO10325.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Pig1-RB | 49..578 | 1..530 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:24:57 Download gff for
UFO10325.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Pig1-RB | 49..578 | 1..530 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:09:09 Download gff for
UFO10325.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Pig1-RB | 49..578 | 1..530 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 01:09:09 Download gff for
UFO10325.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 3248718..3249239 | 1..524 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:24:57 Download gff for
UFO10325.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 3142751..3143272 | 1..524 | 99 | | Minus |
