UFO10337.5prime Sequence
1108 bp (1019 high quality bases) assembled on 2011-12-08
> UFO10337.5prime
CAGTCGACATGGAATCGCGTCTGGGTCTGCTCATCGCCCTGCTGCTGGCG
GCCTTTCAGGCCTGGGCCATGGAAGCACCGTCGAACTATAATCAGAACTC
TACTGAGAGTGGACTGCTGCGGACAGTGCGTCATATCTATGGGCAGTGTG
CATATAGCGAGGACGTTTTCTGGTGCTGCAAGATACAGGGAGTTCGCCTG
CTGGGACGGGCTCTGAAGGTCCCTCAACTGGGGATTGTGGATGGCGTTAG
CTTGGTGCGGCGGGAATCCTTTACCCAGGACACGCGGAGTGGACGCTCTA
GCCTGCTCGAGAGCCAGCTCAGCAATCGCGATCTCGAGCACTTGTCGGGG
AAGAGTCTGGACGCCCTGCTGCTGGAGCGGTTCCTCAACTTTGTCCATAG
TCACCAGCTGCAGGTCAACCTACCACGGTTGCTGCGGTTTGGTGAGCGGA
ATGTCCAGGATTGGCTGCTGCACGTGGTCGGCTACTTTATGCCAGCCAGC
GAAAGCGAGGGTCGCAAAAAGAAGGATGACAAAAAGTATCTGGGACCCTT
CATTGCCGCCGTTCTGTTAAAGACCGCTATTCTAAAGATGGCATACCACT
CCATTGCCATTGTAGCGGGAAAGGCGCTTATTGTGGGCAAGATTGCGCTG
ATCATCAGTGCTATAATCGGTCTGAAAAAACTTGTGGGTCACGACGGCGG
CGAGAAGACCACCTACGAGATCGTCAAGCATCCGCAGGTGCAGCAGAGCC
ACACATACTCGTCCAGCCACCAGGGTGAGTACGATACGGGTGGCCATGAC
GGAGGATCCTACCACCGCAGCATCGACGACGAGATGATGATGCAGGACAA
GGCTTACCAGGCCTGGATGCCCCACGTGACGCATCCCCTTCGCCCGTCGC
CAAGGATCCCGAGCAAGCTTTCTAGACCATTCGTTTGGCGCCGCGGGCCC
AGGTAGTGGTCATATCATAATCATAATCATAATCATATCACACTAGCCTA
GGAGATCCTGGTCATGACTAGTGCTTGATTCTCACTATAAAAACGCCGGC
CGCAACGGACGTCTGACAATTCGAATGGAATCTGAGTCATACTGATCCTA
TCACGATC
UFO10337.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:32:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Osi11-RA | 1167 | CG15596-RA | 70..975 | 9..912 | 4465 | 99.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:32:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 6267791..6268688 | 905..9 | 4425 | 99.8 | Minus |
Blast to na_te.dros performed on 2014-11-27 00:32:57 has no hits.
UFO10337.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-12-08 11:28:34 Download gff for
UFO10337.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Osi11-RA | 1..909 | 9..916 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:25:42 Download gff for
UFO10337.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Osi11-RA | 64..980 | 1..917 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:09:43 Download gff for
UFO10337.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Osi11-RA | 64..980 | 1..917 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 01:09:43 Download gff for
UFO10337.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 6267791..6268692 | 1..905 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:25:42 Download gff for
UFO10337.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 2093513..2094414 | 1..905 | 99 | | Minus |
