UFO10344.5prime Sequence
1085 bp (992 high quality bases) assembled on 2011-12-08
> UFO10344.5prime
CAGTCGACATGCCCCACACAGACGACACATTTCCGGAAGGCAGTTCTTGT
TGTCCTATTGACATTGTTTCCTCAAATAAAGTCATCCTGCGCGGCTATGC
TTCTAAGGCGAATAAGGATGTCGAAGCGGTGGAGGAGCTAGAAGAGATAC
AGGAGATGAATGATGAGCTAAGGGATTTGTTCATCAATACAACTGCCATC
AATTGCTCGTCCCTTTCTGAACTAAAAATCCAGACTGACGCTTTCAACAC
CCTTAAAGAGCGTACACTATTCTCATTGGGATACTCGACAGCCGGGCTTT
TAAAGAAATCAAAAATCAGTAAGGTTCTAAAAGGGAAGGTCAATTTGTAC
CAACAGATTGTGAGCCTTGTAAAGCAACGTACAAAGACCAATTCAGAGAT
CACCATAGGAAAGACAAGTCATCCCGTGCACCTGATGGTCTTACAGAGCT
TTTCGCGAATGTTTCGCGATATGGGCAATGACCTGAGCGTGGCCCTGCCC
GAAAAGATGATTACGCCACGCTCCTTTGGCCTAATCTACGAATGGATGAT
CGAGGACACGCCAGTCTTGCCGCGCCTCGGTCTCCTAGAGGTTTTCCACG
CTGCCAAATTTATGGAGATTCCACAGTTGGTCAGGCAGTGCAAGTATTGC
CTCGATCATGGATTCACTGAGGACTCCGCTGCGATGCTGTACTTTGAGGC
GAAAATACTGAAACTTGAGGTCATCCATTTGCAATATCTTGAGCGCGTCT
CAAAGTTTTTTCTCACGCTGGTGGCATCGAAAGAGTTTTTGAGACTGCCG
CTGAAATCAATGCTATTGCTCATCCAATCGGATCTGATAGGCGTGAATAC
GGAGCTGGAGGTCTTCATGGCAGCCGCTCGGTGGCTAAGCCACCACTGGC
CTCAAAGAGAGGAAACGTAACGGATGTGTATCCAGCATACGTTTTGGACT
ATCCCGCGTGGTTGCTCATCGTTTACAGAATCGATGTCACATCTGGTGGG
GGTGGGGAGATCGTACGCAGCATTGTGCGCAGCATCATGAGCATCCGTAA
CACGAACACGCGGATGTTTATGAAGATTCGAGCCT
UFO10344.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:33:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG30357-RA | 1525 | CG30357-RA | 117..1193 | 9..1069 | 4875 | 97.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:33:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 8720501..8721508 | 1010..9 | 4635 | 98.9 | Minus |
Blast to na_te.dros performed on 2014-11-27 00:33:27 has no hits.
UFO10344.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-12-08 11:28:37 Download gff for
UFO10344.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30357-RA | 117..1207 | 9..1080 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:26:02 Download gff for
UFO10344.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30357-RA | 117..1207 | 9..1080 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:09:55 Download gff for
UFO10344.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30357-RA | 117..1207 | 9..1080 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 01:09:55 Download gff for
UFO10344.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 8720418..8721508 | 9..1080 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:26:02 Download gff for
UFO10344.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 4607923..4609013 | 9..1080 | 97 | | Minus |
