UFO10349.5prime Sequence
1116 bp (986 high quality bases) assembled on 2011-12-08
> UFO10349.5prime
CAGTCGACATGGAGTACAAGATGATTGCACCAGAGCACAGTGAACAGGTG
ATGGAGCATCTGCGGCGCAACTTCTTTGCCGACGAGCCGCTAAACAAGGC
CGCCGGCTTGTGCCAGAACGGCAGCAGTTGCCCCGCCCTGGAGGCGCACT
GTGCCGAGGCCATACAGCACCGGATGAGCGTGATGGCTGTGGACGCAAAG
GAGAAGGATACCTTGAAAATAGTCGGCGTCGTCCTCAATGGCATCCTGAA
GCCGGGCGACACGGCCAAGGCGCTGAGCAAGCTGGACTGCAACGACGATG
CAGATTTCCGCAAGATTTTCGACTTGCTGCACAGGCACAATCTCAAGCAC
AATCTCTTCGAGCACTTCGACGTGGACTGCATGTTCGATGTGCGCATCCT
ATCGGTGGACTCGTGCTACCGTGGCCAGGGGATTGCGAATGAGCTGGTCA
AGCGGTCCGTGGCGGTGGCCAAAAAGAATGGCTTTCGCCTGCTGAAGGCC
GATGCCACCGGCATCTTCTCGCAGAAGATCTTTCGTTCCCATGGCTTTGA
GGTCTTCTCGGAGCAACCCTACAGCAAGTATACGGATGAGAATGGCAAGG
TGATCTTGCCCGTGGAGGCGCCCCACATCAAATTGCAGCAGCTCTACAAG
GCGATCTGTGCGGATGACCAGGATGAGAAGAAGCAGTCGCTTGCAAGCTT
TCTAGACCATTCGTTTGGCGCGCGGGCCCAGGTAAGTGGTCATAATCATA
ATCATAATCATAATCATAATCACAACTAGCCTAGGAGATCCTGGTCATGA
CTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGGCGGCAACCGAGCG
TTCTGAACAAATCCAGATGGAGTTCTGAGGTCATTACTGGATCTATCAAC
AGGAGTCCCAGCGAGCTCGATATCAAATTACCGCCCCCGCCCTGCCACTC
ATCGCAGTACTGTTGTAAATCATTAAGCATCTGCCGACATGAAGCATCCA
CAAAACGGGCATGATGAACCTGAATCGCCAGCGCATCAGCCACTTGTCGC
CTGGCCATAATATATTTGCCATGGTGAAACGGGGGCCAAGAGGTTGTCCC
TATTGGGCCACGTTAA
UFO10349.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:34:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13759-RD | 934 | CG13759-RD | 150..834 | 8..692 | 3395 | 99.7 | Plus |
| CG13759-RC | 938 | CG13759-RC | 154..838 | 8..692 | 3395 | 99.7 | Plus |
| CG13759-RB | 990 | CG13759-RB | 206..890 | 8..692 | 3395 | 99.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:33:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 2583039..2583723 | 8..692 | 3395 | 99.7 | Plus |
Blast to na_te.dros performed on 2014-11-27 00:33:58 has no hits.
UFO10349.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-12-08 11:28:39 Download gff for
UFO10349.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13759-RC | 151..842 | 1..697 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:26:20 Download gff for
UFO10349.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13759-RB | 129..820 | 1..697 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:10:08 Download gff for
UFO10349.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13759-RB | 203..894 | 1..697 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 01:10:08 Download gff for
UFO10349.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 2583036..2583727 | 1..697 | 98 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:26:20 Download gff for
UFO10349.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 2477069..2477760 | 1..697 | 98 | == | Plus |
