UFO10355.5prime Sequence
1101 bp (997 high quality bases) assembled on 2011-12-08
> UFO10355.5prime
CAGTCGACATGGCCGAGCTTCTGTCCCGCGAGAAGGAGCTCTTTAAGATA
AACCAGGAGCTGAATCTCCTGACCCTCAGTCCAGCTGCCGACGCCATGTA
TCCGGCAAAGGGGTCATCCAAATCCACTGCGGTGGCGGTGCCGCGCTTCG
CCACCTTCCAGAAACAAAAGGGGCCGAGCAGCCTGCTCCGGAAAAAGGGT
GCTCCCACGGCGTGCACGAAGGCAGCCCCGAAAGCTTCGCCAGGCAGAGA
GACGGTGCCCACAGCCCGTTCGCCGATGCCCGATATGAGTCTGCTGACCA
AGTCCAAGCCCGCTGCCGGACCCACCTCGCCCACCCCCCGCAATCTTTCC
AAATTTAGTACCTTCACGAAGGATGTGAGCAGCAAGACGGCTACGTATGT
CAAGTACCGGAACCCAAACTTTAGCGAGAGTCCTTCGTTGGACGAACTGC
TGCGTAACGACGCCGATGAGGCAAACCGAAAACCAGATGTGGTCGAAGTG
GAGGTCACACAGAAGCGAGAGAGCACAACCGTCGTCAATGGCCAGCTGAA
GAAGCAGGTCACCAAGGACAACTTTATTAAATTCCTCAAGGCCAAGGTGG
CCATTCTGGAAGAGGATCACGCTCAACACGCCGGAGAGTTGATCCGACAG
AAGGAGCAGCTTGAGCACGCCTTGGAAGCGCAACGCAAGTCAGAGCACCA
GCGCGACCAGGCGATCAACTCCAACAAGCACCTCTCCGAGCAACTGATGC
GGTCCGAACGGCAGTGCGAGGGTTTCAACCAGCGCCAGAAGGAGCAGCAG
CTCGAGTTCATCACCCAGCAGCGGGAGCTGGAGGTGCTGAGCGGGATGCC
AAGGTTTCCAGGCAGACGAACATAAACCTGGAGAACCGACTGTCCCGCGT
CCAGGAGGATGCAGACGCTGCCCGCCAGGAACTCAAGCTGCTGCGCGAGG
AGCAGCGCGACCAGTTGGAGGCCGCATCGGAAGGACTAAAGCTGGCGGGA
CAGCCCGGATCGGGCTCTTAACGCAGCGCGGCGACTTGCTCACGCGTAAC
AAGAGCAGCTCTCTAATGATCGCACACCCTGACGCTGAATCATCTTTTCG
G
UFO10355.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:34:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4681-RA | 1497 | CG4681-RA | 230..1304 | 9..1082 | 5005 | 98.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:34:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 24579027..24579598 | 580..9 | 2845 | 99.8 | Minus |
| 2R | 25286936 | 2R | 24578479..24578946 | 1042..577 | 1965 | 97 | Minus |
Blast to na_te.dros performed on 2014-11-27 00:34:06 has no hits.
UFO10355.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-12-08 11:28:40 Download gff for
UFO10355.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4681-RA | 177..1240 | 1..1062 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:26:24 Download gff for
UFO10355.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4681-RA | 223..1286 | 1..1062 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:10:12 Download gff for
UFO10355.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4681-RA | 223..1286 | 1..1062 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 01:10:12 Download gff for
UFO10355.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 24578458..24578942 | 581..1062 | 97 | <- | Minus |
| 2R | 24579027..24579602 | 1..580 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:26:24 Download gff for
UFO10355.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 20465981..20466465 | 581..1062 | 97 | <- | Minus |
| arm_2R | 20466550..20467125 | 1..580 | 99 | | Minus |
