UFO10359.5prime Sequence
1056 bp (965 high quality bases) assembled on 2011-12-08
> UFO10359.5prime
CAGTCGACATGTCGGCACGCAAGGAGAAACGAGACATACATTACTGGCGA
AAACAGGCAGCCACCTTGCCGGATTTTGTGCCGCCGTGGAAGCGGGAACA
GGATTTGCAGCAGCTGCAACATCGAGCCTCGATCCTGTGGTCGCCGCAAC
TGCAGGACCAAGATGACAAGGCTGTTCGCGAATACCTTGACTATGCGGCC
AGTCTCTATGATATCGAGGAGGAGCAGGCGCTGTTCATCCTGCGGCGTCA
CGGATACGACCTGCCCCTGGCACATCGACGTCTGGAGAAGACTGAGACAG
CTCGAGGATGTCGCTACCATCGCTGGAAGGCCGAGGATCTCATCCGTCTT
ACCAAGGCCTTCGAGCAATACGGCACCGACTTCGCAAAGGTACGAAAGGA
GCTACCCCACTTTCCCCTGGCCGAGCTTCGGCTGTACTTCTCCTTCATGT
CCTCGGCGTTGGAGACAGATGACCAACAGGCCATCCATAGAGCAAGCTTT
CTAGACCATTCGTTTGGCGCGCGGGCCCAGGTAAGTGGTCATAATCATAA
TCATAATCATAATCATAATCACAACTAGCCTAGGAGATCCTGGTCATGAC
TAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGTT
CTGAACAAATCCAGATGGAGTTCTGAGGTCATTACTGGATCTATCAACAG
GAGTCCAAGCGAGCTCGATATCAAATTACGCCCCGCCCTGCCACTCATCG
CAGTACTGTTGTAATTCATTAAGCATTCTGCCGACATGGAAGCCATCACA
AACGGCATGATGAACCTGAATCGCCAGCGGCATCAGCACCTTGTCGCCTT
GCGTATATATTTGCCCATGGTGAAAACGGGGGCGAAGAGTTGTCCATATG
CCACGTTTAAATCAAACTGTGAACTCACCCAGGATGCTGAACGAAAACAT
ATCTCATAACTCTTTAGAATAGCAGTTTCCACCGTAACACGCCCATCCTG
CCAATAATGTGTAGACTGCGAATCGTCTGGAATCACTCCGAGCGATGAAC
GTCAGT
UFO10359.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:33:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31875-RB | 1179 | CG31875-RB | 244..731 | 4..491 | 2395 | 99.4 | Plus |
| CG31875-RD | 1241 | CG31875-RD | 311..793 | 9..491 | 2385 | 99.6 | Plus |
| CG31875-RC | 1363 | CG31875-RC | 433..915 | 9..491 | 2385 | 99.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:33:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 9996009..9996491 | 491..9 | 2385 | 99.6 | Minus |
Blast to na_te.dros performed on 2014-11-27 00:33:43 has no hits.
UFO10359.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-12-08 11:28:38 Download gff for
UFO10359.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31875-RB | 137..637 | 1..500 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:26:11 Download gff for
UFO10359.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31875-RB | 240..740 | 1..500 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:10:02 Download gff for
UFO10359.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31875-RB | 240..740 | 1..500 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 01:10:02 Download gff for
UFO10359.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 9996009..9996494 | 2..491 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:26:11 Download gff for
UFO10359.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 9996009..9996494 | 2..491 | 98 | | Minus |
