UFO10360.5prime Sequence
1097 bp (1001 high quality bases) assembled on 2011-12-08
> UFO10360.5prime
CAGTCGACATGTTGTTACTGACAAGTCTTAAAAGCCTGGCAAAACCAGCT
ACATGGGGAGTTGTGGTCCGCACTTTAAAGGTCGCCGTTGTCGGTGCCGG
AGGAGGAATTGGACAACCGCTATCGCTTCTGCTCCGTCGCTGTCCTGGAA
TCGATGAGCTGGCTCTACATGATCTCAGCGAAATGAAGGGAATTGCTACG
GATCTATCCCATATAAGCCAAACGGGAAAGGTGATAGGTTTTACCGGTGA
AAAGGAACTGGAGTCGGCGGTGAGTGGAGCTGATGTGGTGGTTGTGGCGG
CAGGAATGCCACGTCTGCCAGGAATGCAAAGGGATCACCTGATGGCCGCC
AATGGAAATGTTGCAGTGAAAGTTGCCACTGCCATTAGCAATGCCTCTCC
ACGAGCTCATCTTGCCTTTATTACCAATCCGGTCAATATGATTGTGCCCG
CCGCAGCTGAGGTTCTTATGGCCCATGGAACTTTTGATTCTCGTCGGCTC
TTCGGTATTACGACTTTGGATGTGGTGCGATCGAAAAAGTTCATTGGTGA
TTCTATGAACATATCACCGGATGACGTAAACATTCCAGTTATTGGTGGCC
ATGCGGGGATTACAATTCTACCGCTCATTTCGCAGTGTCAGCCGATATAT
AGATGTGATCTCCAGGAGATCCAGAATCTAACTCATCGCATTCAGGAGGC
GGGCACAGAGGTGGTGAATGCCAAAGCTGGAAAAGGATCTGCCACCCTAT
CGATGGCTTATGCTGGCGCAACTTTCGTGAACTCCCTGCTGCGTGGAAAT
TGCTGGACAGGATGGTCTAATCGAGTGCGCTTTTGTCGCCTCCAAACTAA
CCGACGCCCCATTCTTTGCTAGTCCATTGGAATTGGGAAAGGATGGTATC
AGCGCTATATACCACTTCCCCAGATGAGTGACTACGAAAAGGAGCTTTGG
AAAGCTGCTACCTATTCTACGACGAATGCTGATGAGGGTGTCATTTTGCA
AAATGATTTGGAGTGACATTCCATTCCTCCATCAGCGTCTGGCGCAGCCT
TTCTAGAACATTCGGTTGGCGCGCGGGCCAGTAATGTCTAATCCTGA
UFO10360.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:33:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10748-RA | 1146 | CG10748-RA | 29..1040 | 9..1015 | 4845 | 99 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:33:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 12971340..12972331 | 997..9 | 4670 | 99.2 | Minus |
Blast to na_te.dros performed on 2014-11-27 00:33:51 has no hits.
UFO10360.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-12-08 11:28:39 Download gff for
UFO10360.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10748-RA | 22..1056 | 1..1030 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:26:16 Download gff for
UFO10360.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10748-RA | 22..1056 | 1..1030 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:10:04 Download gff for
UFO10360.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10748-RA | 22..1056 | 1..1030 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 01:10:04 Download gff for
UFO10360.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 12971323..12972337 | 1..1013 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:26:16 Download gff for
UFO10360.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 12964423..12965437 | 1..1013 | 98 | | Minus |
