UFO10361.5prime Sequence
1089 bp (974 high quality bases) assembled on 2011-12-08
> UFO10361.5prime
CAGTCGCCATGTCGCAGCTGAACGCGGAGACCCAGCAGAGGCACTTCATC
ACGCGCAGCAGTTATGAGGGCGCCTGGGATAGATTGGTGAATGTGATGGA
CGGATTTGGGAGCTACCGCTATCCGGATGGGAGCGAGTATCGAGGAAGGT
TCCATCAGGGTCAGTTCCACGGCTATGGCCATTTGCGACTCGCCCAGCCG
TACCGCTTTACGGTTAAGGGTGAGTTCGAGCATGGTCGCCTGGTGACAGT
GGAGGACATGTGGTTTTCCGACGGTCTGCATGTGGATGGCAGATTTAATG
GCATGGTCTTGCAGTGCGATGAATGGGATTACCTGACGCCGAAGGATCGG
CGTTATCATGCCGAGCGTCGTTATGGCCAACAGCCGGTTGGCCCCACTGC
CTTTCTTACATCCAAAATGCAACCCAGAAATATTCCCGAACATTGCTATG
ATGTGGAGGAGGGTCTGTTCAATAGTAAGACCTGTTGGTTGACGGACCGT
CCGAGTCCGCTCCATCAATTCATGTACGTGAGCTGCCCGCAAGATAAGGA
TTGGATTAAGAAGAATTGCAGGAAGGCTAGAACATCGCGTATAATTGAGC
CACCATCCGACTTCTGTCGCCGCATTATAGCCAACAATTTGGCAACGGAA
CGAGCCCAGTTGCGAAGCACGGCCATATATGCACCCAATGGACAAGTGGA
TCGGGAGCGATACTTCCACAAGTTGACCAAGAAACGTGGACAGCCGAATG
AGCCGCTGGAGAACATTCCAAGGCGTCCCATGCCCGTCGACGATCCCGCC
TGGGAGACGGAGATGTGTGTGCGTGCCTATGCCGGGATGTTGGATAAACA
GCAGAAGGATCAAATGGAGTTTAAGCGCGTGCATCCTTGCGCCAAATGGA
GACGGTGAGAGACCACGCCGATGTCGAGCACTCAGATGTACGCAATCGCA
GTCGGTGGAACCTCCAGCTGCCAGACGACGCTTTGGGCAGGATGACCTGT
TCTTAAACTTTGGAGAATCTAACGCTCCGCCACAACTTGATGAGAACGAC
GCGGATAACATAAATGTGGTGCATCTATCTATACGCCGG
UFO10361.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:34:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3222-RA | 1354 | CG3222-RA | 86..1182 | 9..1088 | 4755 | 96.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:34:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 9599073..9600091 | 9..1019 | 4430 | 97.3 | Plus |
Blast to na_te.dros performed on 2014-11-27 00:34:28 has no hits.
UFO10361.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-12-08 11:28:42 Download gff for
UFO10361.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3222-RA | 86..1060 | 9..977 | 98 | == | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:26:36 Download gff for
UFO10361.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3222-RA | 86..1060 | 9..977 | 98 | == | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:10:20 Download gff for
UFO10361.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3222-RA | 86..1060 | 9..977 | 98 | == | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 01:10:20 Download gff for
UFO10361.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 9599073..9600047 | 9..977 | 98 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:26:36 Download gff for
UFO10361.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 9592173..9593147 | 9..977 | 98 | == | Plus |
