UFO10366.5prime Sequence
1107 bp (982 high quality bases) assembled on 2011-12-08
> UFO10366.5prime
CAGTCGACATGCTGGCTTTCGAGAAGGAGATCGTGGAGAAATCTAGATAT
TTTGATCTAATCACAAAAGAGTGTCAGGATTACCCTATGGCCAAGACAAT
GCCAGTTCTAAAGCAGCCCGAGAATTTCCAGGAACAAGAGGAGGACGTTG
TAATGGCCGTGCAAGAAAAACTCAAATTTTTCCGCAAACTAACCAGCAAT
GGTCCCGCAGTCCCGACACCGCTTAAAGTCGTTGAAAAGGAGGACATAGG
ACATAAGGAGATACCAAAGGTGGTCAAGAAAGTTGACCGTAAAACGAAAC
TGCTGCAAGCCATACCAGCGGTCTTCAAACATAGCCACAATCGACGCTTT
CGAAGATCCTTATTTTTAAGGTCCAACTATATCGAGCAATTTCGGCGTTG
GACGGATCAAAAAAACAAGTTAAATAGAAAGCGCTTGAATGAAGCACATC
AGTTGTGTTTAAAAGCCAAACACGAGCGAATTGCCTGCGAAATCGATAGA
TACAAGAAGCTGATCCTTAAGCAGTCCGTCCATGTGATCGAGGACATAAG
AATCAGCAGCGAATTGATTCCGCTGACCAAAGAACACCATGATCGGCTGA
TGGAACTATCTAAGTATCCACTGCAGCAGGTAATTGTGGCCAAGTTCAAT
TTGGACATCTGCGGCAGTGATATCAAAATCCTGACCAGTGGCGGCTGGCT
CAACGACAAAATAATCAACTTTTACATGAACCTACTGGTCGAGCGATCGG
AGAAGCGTCCTGATACAGTGCCCAGCGTGTATGCCATGAGCACTTTCTTT
GTGCCCCGCCTGCTGCAAAGTGGCTTCGATGGCGTAAAACGCTGGACTAG
AAAGGTGGATCTGTTTAGCATGGACCTCATACTTGTGCCTGTTCACCAAT
GCTCGTTCACTGGTGCCTGGTCATAATCGATTTGCTGCGAAAACATGCTC
TACTACATTCAGAGCGCGTGACCCGATCTGATGCAGCACTAGTGAAGTAC
TCCATGAGTCGAGACAGCTCGGCTGGTTGACCCAATGATTCGCATCAGAT
GCCTAATGTGCCGCAACAGAACACTGACGACTGCGCGATTCGCTGCATGT
TGGCGAA
UFO10366.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:34:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32110-RA | 1376 | CG32110-RA | 48..1050 | 8..1000 | 4760 | 98.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:34:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 12808768..12809720 | 8..957 | 4600 | 99.6 | Plus |
Blast to na_te.dros performed on 2014-11-27 00:34:51 has no hits.
UFO10366.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-12-08 11:28:44 Download gff for
UFO10366.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32110-RA | 42..1050 | 1..1000 | 98 | == | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:26:50 Download gff for
UFO10366.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32110-RA | 42..1050 | 1..1000 | 98 | == | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:10:30 Download gff for
UFO10366.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32110-RA | 42..1050 | 1..1000 | 98 | == | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 01:10:30 Download gff for
UFO10366.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 12808762..12809770 | 1..1000 | 98 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:26:50 Download gff for
UFO10366.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 12801862..12802870 | 1..1000 | 98 | == | Plus |
