UFO10367.5prime Sequence
1110 bp (989 high quality bases) assembled on 2011-12-08
> UFO10367.5prime
CAGTCGACATGTGCTTAAGGCTTTTACTATCTATACTAGTATCAATTGCT
GGCCTGGCTTGTGCTGCTCGAATTCCTGGGCCAGAGGAACGGATTGTCGG
AGGTTCATACATCCCCATCGAATATGTTCCTTGGCAAGTGTCGGTGCAAA
ATAATTCGTTACATTGCTGTGGTGGAGTCATCTACAGTGATCGAGCTATT
TTGACTGCCGCTCATTGCCTTTCTAATGTAACTGTGACGGATCTATCAGT
TCGCGCTGGATCTTCGTATTGGAGCAAAGGTGGTCAGGTGTTAAAGGTGC
TAAAGACAATTGCACATCCAAAATACGTGCCTAAACTTTACAATCCGTAT
GATATTGCTGTGCTAATTTTGGAGGCACCTCTCAGACTTGGTGGCACTGT
AAAGAAAATTCCTCTAGCCGAACAGACTCCCGTGGCTGGTACAATTGTTT
TGACCTCCGGATGGGGATATACACGAGAGAACTCTTCATTCCTTTGGCCA
ATACTGCAAGGCGTACATGTAGCCATTCTGAATAGAACGGATTGTCTGAA
AGCTTACAAGCACGTTAATATAACTATCGACATGATCTGTGCCGACGGAC
AAAGATGGGATACTTGTCAAGGTGATTCCGGTGGTCCTTTGATTGAAACA
ACGAAAGGCGGCCATAGGCAACTCATAGGCATGGTTAGCTGGGGAGACGG
TTGTGGTACAAATCCTGGCGTCTACGAAGATATTGCATTCTTCCACAACT
GGATCAAATATACAGTTAAAAAAAATATTTACAAAAGTATTGTTAAAATA
GCAAGCTTTCTAGACCATTCGTTTGGCGCGCGGGCCCAGGTAAGTGGTCA
TAATCATAATCATAATCATAATCATAATCACAACTAGCCTAGAGATCCTG
GTCATGACTAGTGCTTGATTCTCACCATAAAAAAACGCCCGGCGGCAACG
AGCGTTCTGACAATCCAGATGGAGTTCTGAGTTCATACTGATCTATCACA
GGAGTCAGCGAGCTCGATTCAATACGCTCCGCCTGCCACTCATCGCAGTA
CTGTTGTAATTCATTAAGCATTCTGCGACATGGTAGCATCAACGCATGAT
GACTGAATCG
UFO10367.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:35:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31681-RA | 949 | CG31681-RA | 30..821 | 9..800 | 3960 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:34:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 2286053..2286844 | 800..9 | 3960 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 00:34:58 has no hits.
UFO10367.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-12-08 11:28:45 Download gff for
UFO10367.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31681-RA | 20..829 | 1..809 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:26:53 Download gff for
UFO10367.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31681-RA | 20..829 | 1..809 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:10:33 Download gff for
UFO10367.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31681-RA | 20..829 | 1..809 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 01:10:33 Download gff for
UFO10367.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 2286045..2286854 | 1..809 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:26:53 Download gff for
UFO10367.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 2286045..2286854 | 1..809 | 99 | | Minus |
