Clone UFO10377 Report

Search the DGRC for UFO10377

Clone and Library Details

Library:UFO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2008-06-20
Comments:BD Creator expression clones with C-terminus FLAG HA tag for transgenic expression using PhiC31 integrase system
Original Plate Number:103
Well:77
Vector:pUAST-CFLAGHA-BD-PHI
Associated Gene/TranscriptCG33218-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

UFO10377.5prime Sequence

1113 bp (982 high quality bases) assembled on 2011-12-08

> UFO10377.5prime
CAGTCGACATGGCTAAAATAAATCTTTGGTTGGGTAAACTCCGTGACTCT
GTTCTGTCCAGGCTGCAGAGCATCAAGAAACCCCTACCCCTTCCTTCGAC
CAAGGGCCCCCTCAATGCCAATGAAACCTCAAATTCCGAAGGTAATATTA
GTGACTTTCAGCAGGGCGATCCAATAATTCCACCCATCGAAGCTAACAAA
ATGATACCGAGGCCTCAAAATGGATTCGTCAGCCGAGCCCTCTACTACCG
AGGATACTACATTAGGCGTGCAAGCTTTCTAGACCATTCGTTTGGCGCGC
GGGCCCAGGTAAGTGGTCATAATCATAATCATAATCATAATCATAATCAC
AACTAGCCTAGGAGATCCTGGTCATGACTAGTGCTTGGATTCTCACCAAT
AAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACAAATCCAGATGGAGTT
CTGAGGTCATTACTGGATCTATCAACAGGAGTCCAAGCGAGCTCGATATC
AAATTACGCCCCGCCCTGCCACTCATCGCAGTACTGTTGTAATTCATTAA
GCATTCTGCCGACATGGAAGCCATCACAAACGGCATGATGAACCTGAATC
GCCAGCGGCATCAGCACCTTGTCGCCTTGCGTATAATATTTGCCCATGGT
GAAAACGGGGGCGAAGAAGTTGTCCATATTGGCCACGTTTAAATCAAAAC
TGGTGAAACTCACCCAGGGATTGGCTGAGACGAAAAACATATTCTCAATA
AACCCTTTAGGGAAATAGGCCAGGTTTTCACCGTAACACGCCACATCTTG
CGAATATATGTGTAGAAACTGCCGGAAATCGTCGTGGTATTCACCTCCAG
AGCGATGAAAACGTTTCAGTTTGCTCATGGAAAACGGTGTAACAAGGGTG
AACACTATCCCATATCACCAGCTCACGGTCTTTCATGGCATACGAATTCC
GGATGAGCATTCATCAGGCGGGCAGAATGTGAATAAGGCGGATAAACTGG
TGCTTATTTTTCTTTACGGTTCTTAAAAGGCGGTAAAATCAGCCTGACGG
GTCTGGGTAAGGTACCTGGAGCAACTGAACTGAAATGCCTCAAGTGTTCT
TACGAATGCAATG

UFO10377.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed on 2014-11-27 00:35:59 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:35:56
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 2330411..2330613 67..269 1015 100 Plus
X 23542271 X 2330296..2330355 9..68 300 100 Plus
Blast to na_te.dros performed 2014-11-27 00:35:58
Subject Length Description Subject Range Query Range Score Percent Strand
transib1 2167 transib1 TRANSIB1 2167bp 222..299 832..906 121 65.4 Plus

UFO10377.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-12-08 11:28:50 Download gff for UFO10377.5prime
Subject Subject Range Query Range Percent Splice Strand
CG33218-RA 135..408 4..279 97   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 01:11:01 Download gff for UFO10377.5prime
Subject Subject Range Query Range Percent Splice Strand
X 2330293..2330355 4..68 95 -> Plus
X 2330413..2330613 69..269 100 == Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 01:11:01 Download gff for UFO10377.5prime
Subject Subject Range Query Range Percent Splice Strand
X 2330293..2330355 4..68 95 -> Plus
X 2330413..2330613 69..269 100 == Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:27:24 Download gff for UFO10377.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 2224446..2224646 69..269 100 == Plus
arm_X 2224326..2224388 4..68 95 -> Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:27:24 Download gff for UFO10377.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 2224446..2224646 69..269 100 == Plus
arm_X 2224326..2224388 4..68 95 -> Plus