UFO10377.5prime Sequence
1113 bp (982 high quality bases) assembled on 2011-12-08
> UFO10377.5prime
CAGTCGACATGGCTAAAATAAATCTTTGGTTGGGTAAACTCCGTGACTCT
GTTCTGTCCAGGCTGCAGAGCATCAAGAAACCCCTACCCCTTCCTTCGAC
CAAGGGCCCCCTCAATGCCAATGAAACCTCAAATTCCGAAGGTAATATTA
GTGACTTTCAGCAGGGCGATCCAATAATTCCACCCATCGAAGCTAACAAA
ATGATACCGAGGCCTCAAAATGGATTCGTCAGCCGAGCCCTCTACTACCG
AGGATACTACATTAGGCGTGCAAGCTTTCTAGACCATTCGTTTGGCGCGC
GGGCCCAGGTAAGTGGTCATAATCATAATCATAATCATAATCATAATCAC
AACTAGCCTAGGAGATCCTGGTCATGACTAGTGCTTGGATTCTCACCAAT
AAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACAAATCCAGATGGAGTT
CTGAGGTCATTACTGGATCTATCAACAGGAGTCCAAGCGAGCTCGATATC
AAATTACGCCCCGCCCTGCCACTCATCGCAGTACTGTTGTAATTCATTAA
GCATTCTGCCGACATGGAAGCCATCACAAACGGCATGATGAACCTGAATC
GCCAGCGGCATCAGCACCTTGTCGCCTTGCGTATAATATTTGCCCATGGT
GAAAACGGGGGCGAAGAAGTTGTCCATATTGGCCACGTTTAAATCAAAAC
TGGTGAAACTCACCCAGGGATTGGCTGAGACGAAAAACATATTCTCAATA
AACCCTTTAGGGAAATAGGCCAGGTTTTCACCGTAACACGCCACATCTTG
CGAATATATGTGTAGAAACTGCCGGAAATCGTCGTGGTATTCACCTCCAG
AGCGATGAAAACGTTTCAGTTTGCTCATGGAAAACGGTGTAACAAGGGTG
AACACTATCCCATATCACCAGCTCACGGTCTTTCATGGCATACGAATTCC
GGATGAGCATTCATCAGGCGGGCAGAATGTGAATAAGGCGGATAAACTGG
TGCTTATTTTTCTTTACGGTTCTTAAAAGGCGGTAAAATCAGCCTGACGG
GTCTGGGTAAGGTACCTGGAGCAACTGAACTGAAATGCCTCAAGTGTTCT
TACGAATGCAATG
UFO10377.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed on 2014-11-27 00:35:59 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:35:56
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 2330411..2330613 | 67..269 | 1015 | 100 | Plus |
X | 23542271 | X | 2330296..2330355 | 9..68 | 300 | 100 | Plus |
Blast to na_te.dros performed 2014-11-27 00:35:58
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
transib1 | 2167 | transib1 TRANSIB1 2167bp | 222..299 | 832..906 | 121 | 65.4 | Plus |
UFO10377.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-12-08 11:28:50 Download gff for
UFO10377.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG33218-RA | 135..408 | 4..279 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 01:11:01 Download gff for
UFO10377.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 2330293..2330355 | 4..68 | 95 | -> | Plus |
X | 2330413..2330613 | 69..269 | 100 | == | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 01:11:01 Download gff for
UFO10377.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 2330293..2330355 | 4..68 | 95 | -> | Plus |
X | 2330413..2330613 | 69..269 | 100 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:27:24 Download gff for
UFO10377.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 2224446..2224646 | 69..269 | 100 | == | Plus |
arm_X | 2224326..2224388 | 4..68 | 95 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:27:24 Download gff for
UFO10377.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 2224446..2224646 | 69..269 | 100 | == | Plus |
arm_X | 2224326..2224388 | 4..68 | 95 | -> | Plus |