UFO10379.5prime Sequence
1112 bp (987 high quality bases) assembled on 2011-12-08
> UFO10379.5prime
CAGTCGACATGGCAAAACAAGAAGCAACAAATGGGAAAGTTCGTAATGCA
TCTCTTCATCTGGAGAAGCTGTTGATCGGGGGAAAATATCGGCTGGTAAA
GCCCATTGGGTCCGGGTCCTTCGGCGATATATATCTCGGACTAAGCATCA
CGGATGGATCCGAGGTGGCCATTAAGGTGGAGAAGAACGATGCCAAGTAC
CCGCAGCTGATATACGAGGCGAAAGTGTACGAACAGCTGGCCCGCTGTCC
GGGCTTCCCGACTCTACTTCATTATGGATGCGAGAAGAACTATAATGCCA
TGGTTATGGACCTATTAGGTCCTTCCCTAGAAGAACTTTTTAACCTCTGC
AAACGCCGATTCTCGCTGAAGACCGTACTCATGTTGACAGACCAGCTGCT
AATGCGAATTGAGTGTGTCCACGAACGTGGGTTCATTCATCGTGACATTA
AACCAGATAACTTCCTAATGGGTCTGGATCGCCACTGCAACAAGCTGTAC
CTCATCGATTTTGGCCTGTCCAAGAGATACAAGGACATAGAGTCAGAGAT
TCATATACCATACCGCACGGATCGGAATCTAACTGGTACTGTTCGCTATG
CCTCTATAAATGCACAGATAGGCGTTGAGCAATCCCGTCGGGATGACATG
GAGTCCATGTCCTATTGTTTGATGTACTTCAATCTGGGAAAGTTACCCTG
GCAGGGTATTACGGCCGCCAACAAGAAGCAAAAGTACGAGAAGATATTGG
AGAAAAAGACAAGCGTCACGATCGCTCAGCTCTGCAAAGGATCTCCCTCC
GAATTTTGCCCTGCTTATGACCTATGTCAGGAATCTTGGTTTCAAGGAGC
CGCCGGATCACACTTATCTTCGCCAGATATTCCGCATACTTTTCCGCTCA
CTGAATCATCATTACGACTATATATATGACTGGACTGCCTTGCAGCAGCA
AAGGATCAAATCTGCCGCAGCAGGAACAGATTCTGGAATCGAACGAGAAG
AAGTTCGCAACGGATGGGACGGGTTGTGAGCTCAGCGGACAGGAACGGCA
CAAGAATTGAGCCTGAATCGACCTGCCCAACTTCTACCCACAGGCCAAGT
GTCTCTTAAGGG
UFO10379.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:36:15
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG7094-RA | 1412 | CG7094-RA | 155..1260 | 9..1101 | 4965 | 97.5 | Plus |
dco-RD | 4156 | CG2048-RD | 902..1085 | 575..758 | 290 | 77.8 | Plus |
dco-RC | 3667 | CG2048-RC | 1514..1697 | 575..758 | 290 | 77.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:36:12
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 17554608..17555611 | 1010..9 | 4780 | 99.3 | Minus |
3R | 32079331 | 3R | 31057156..31057339 | 758..575 | 290 | 77.2 | Minus |
X | 23542271 | X | 12655701..12655794 | 432..525 | 230 | 83 | Plus |
Blast to na_te.dros performed on 2014-11-27 00:36:13 has no hits.
UFO10379.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-12-08 11:28:51 Download gff for
UFO10379.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7094-RA | 148..1175 | 1..1023 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:27:33 Download gff for
UFO10379.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7094-RA | 148..1175 | 1..1023 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:11:05 Download gff for
UFO10379.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7094-RA | 148..1175 | 1..1023 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 01:11:05 Download gff for
UFO10379.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 17554628..17555618 | 1..991 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:27:33 Download gff for
UFO10379.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 17554628..17555618 | 1..991 | 99 | | Minus |