Clone UFO10379 Report

Search the DGRC for UFO10379

Clone and Library Details

Library:UFO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2008-06-20
Comments:BD Creator expression clones with C-terminus FLAG HA tag for transgenic expression using PhiC31 integrase system
Original Plate Number:103
Well:79
Vector:pUAST-CFLAGHA-BD-PHI
Associated Gene/TranscriptCG7094-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

UFO10379.5prime Sequence

1112 bp (987 high quality bases) assembled on 2011-12-08

> UFO10379.5prime
CAGTCGACATGGCAAAACAAGAAGCAACAAATGGGAAAGTTCGTAATGCA
TCTCTTCATCTGGAGAAGCTGTTGATCGGGGGAAAATATCGGCTGGTAAA
GCCCATTGGGTCCGGGTCCTTCGGCGATATATATCTCGGACTAAGCATCA
CGGATGGATCCGAGGTGGCCATTAAGGTGGAGAAGAACGATGCCAAGTAC
CCGCAGCTGATATACGAGGCGAAAGTGTACGAACAGCTGGCCCGCTGTCC
GGGCTTCCCGACTCTACTTCATTATGGATGCGAGAAGAACTATAATGCCA
TGGTTATGGACCTATTAGGTCCTTCCCTAGAAGAACTTTTTAACCTCTGC
AAACGCCGATTCTCGCTGAAGACCGTACTCATGTTGACAGACCAGCTGCT
AATGCGAATTGAGTGTGTCCACGAACGTGGGTTCATTCATCGTGACATTA
AACCAGATAACTTCCTAATGGGTCTGGATCGCCACTGCAACAAGCTGTAC
CTCATCGATTTTGGCCTGTCCAAGAGATACAAGGACATAGAGTCAGAGAT
TCATATACCATACCGCACGGATCGGAATCTAACTGGTACTGTTCGCTATG
CCTCTATAAATGCACAGATAGGCGTTGAGCAATCCCGTCGGGATGACATG
GAGTCCATGTCCTATTGTTTGATGTACTTCAATCTGGGAAAGTTACCCTG
GCAGGGTATTACGGCCGCCAACAAGAAGCAAAAGTACGAGAAGATATTGG
AGAAAAAGACAAGCGTCACGATCGCTCAGCTCTGCAAAGGATCTCCCTCC
GAATTTTGCCCTGCTTATGACCTATGTCAGGAATCTTGGTTTCAAGGAGC
CGCCGGATCACACTTATCTTCGCCAGATATTCCGCATACTTTTCCGCTCA
CTGAATCATCATTACGACTATATATATGACTGGACTGCCTTGCAGCAGCA
AAGGATCAAATCTGCCGCAGCAGGAACAGATTCTGGAATCGAACGAGAAG
AAGTTCGCAACGGATGGGACGGGTTGTGAGCTCAGCGGACAGGAACGGCA
CAAGAATTGAGCCTGAATCGACCTGCCCAACTTCTACCCACAGGCCAAGT
GTCTCTTAAGGG

UFO10379.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:36:15
Subject Length Description Subject Range Query Range Score Percent Strand
CG7094-RA 1412 CG7094-RA 155..1260 9..1101 4965 97.5 Plus
dco-RD 4156 CG2048-RD 902..1085 575..758 290 77.8 Plus
dco-RC 3667 CG2048-RC 1514..1697 575..758 290 77.8 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:36:12
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 17554608..17555611 1010..9 4780 99.3 Minus
3R 32079331 3R 31057156..31057339 758..575 290 77.2 Minus
X 23542271 X 12655701..12655794 432..525 230 83 Plus
Blast to na_te.dros performed on 2014-11-27 00:36:13 has no hits.

UFO10379.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-12-08 11:28:51 Download gff for UFO10379.5prime
Subject Subject Range Query Range Percent Splice Strand
CG7094-RA 148..1175 1..1023 98   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:27:33 Download gff for UFO10379.5prime
Subject Subject Range Query Range Percent Splice Strand
CG7094-RA 148..1175 1..1023 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:11:05 Download gff for UFO10379.5prime
Subject Subject Range Query Range Percent Splice Strand
CG7094-RA 148..1175 1..1023 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 01:11:05 Download gff for UFO10379.5prime
Subject Subject Range Query Range Percent Splice Strand
2L 17554628..17555618 1..991 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:27:33 Download gff for UFO10379.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 17554628..17555618 1..991 99   Minus