UFO10382.5prime Sequence
1079 bp (967 high quality bases) assembled on 2011-12-08
> UFO10382.5prime
CAGTCGACATGGCCCACAGGGAGTACAATCGTCGTGATGGCCAGGCAGAG
GGATTGGGACTAGGTGGTGGCGATGCAGACAACAGTGTACGTATGCGACA
CCCCACCCCACCACCGCTGGCGGTGCAGCATGCAAGATCTGGGGCGATGG
TTGTGGAACTGGCAGTGGACCCTTCCCGTGCGATGAGGTCGACCAACCAG
CAGCAGCCAATTGATCGGGATCAGTTGAGGATCAGCACGGAGGAAAGCTG
TCAGGGATCCGAGTTGGTTGTCGCATCATCACATCTATCCAAAAAAATTC
AAGAACATCGCCGACCAAATCAGCTGGTGCGCTTTTGCCTACGATTGGGC
TACAACACCCTGCTGTATCCGTACGAAATGGCCAAGGTTCTTATCCAACT
GGGACATGAACCGCTTCAGGCGAAGCCCTTTGTTATGCGACTGATTCAAC
GGCGGCCACGCCTCTTTTTGCCCAGTGTCCATCGGTATGTGCAGCACATT
CAGCATATAGATGGCTATACGGGAATGTATCGTGGGTTGACCGCTCGCCT
GGCCGCCAGCATAGTAGACTATTTGCTTGGCGATCTTCTGCTGGCTACCT
TGCACTTTGCACCCTATAAGAGAGGCCCCAAGGAGGGACTGAGCCTCAAG
GAGTTCTGGTGGAATCTGACAAGGAACAGCTTGCGCATTACCACCGTAGT
GGTTATAACACATCCCTTTTACGTGGTTATGGTGCGCCAGATAGCCCAGT
TTGTGGGTGGTGAACACGTTTATGAGGGTCTCGTTGGCAGCCTGATGACT
CTTGCGCAACAGGAGGGATGTGCAGGACTTTTTGCGGGCATGGTGCCACG
CCTTTTGGGCGAGTGAGCGTCCTTTTCATTACGAGCGCTCTGAGTCACCT
TTGCGTCGTCTTCTGCCAATGAGCGAACTCAGCATCAGTATAACACCGCG
GTAATTCAGATGATGCAAGCTAGTGCCTATCACTGGAGGTGACAATCCAC
CTGCATGCGACGAGCACATTACCGCATGTGAGCCACGGAGCATGCCGCTC
TTACATCACTTGGTCGAACTTGCTTTACG
UFO10382.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:35:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10920-RA | 1764 | CG10920-RA | 127..1199 | 9..1067 | 4835 | 97.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:35:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 7853159..7854118 | 965..9 | 4560 | 99.1 | Minus |
Blast to na_te.dros performed 2014-11-27 00:35:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| R2-element | 3607 | R2-element DMRER2DM 3607bp Derived from X51967 (g8432) (Rel. 24, Last updated, Version 1). | 1675..1750 | 719..795 | 121 | 65.4 | Plus |
UFO10382.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-12-08 11:28:46 Download gff for
UFO10382.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10920-RA | 96..1172 | 9..1073 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:27:05 Download gff for
UFO10382.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10920-RA | 96..1172 | 9..1073 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:10:43 Download gff for
UFO10382.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10920-RA | 127..1203 | 9..1073 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 01:10:43 Download gff for
UFO10382.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 7853042..7854118 | 9..1073 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:27:05 Download gff for
UFO10382.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 7747075..7748151 | 9..1073 | 97 | | Minus |
