UFO10383.5prime Sequence
1092 bp (988 high quality bases) assembled on 2011-12-08
> UFO10383.5prime
CAGTCGACATGAACCTGAGCACCCTTCTGAGGAGTGTGAGCAACGGTCTT
GGCTTCGGAACCGTCACGAGAAAGAGCGACTTGGGTCGTCCCCTGGCCCC
TCTTAGCTCCACGTCGAGCTCGTCTTCAAATAATTCAAATTTGGATCCCG
TTTCCAGTCTCTTACTTCCCTCGGAGGACGAAGAGGACGAGCCCATATCA
CTGGGCGAAAATCATCTGGCCTCAACTGATGCCAGCCTGAACAAAAACCA
GGAGCCCAATCCCTACCAGCAGACCGTCCAACAGATACTGCGACTAGTGA
ATGAACTGGAGCACACAATTCACGAGGATCGGCAGCAGGAGTTCAAGCTC
CGAATGGCCCTCGATCGGCAGACAGAACGGGTTCAGGAACTGGTGTTTTC
ACTGGACACGGAAAGGAAGCGAAACGAGCGACTGGTGCAGTTGCTCCGGG
GAATCGATAGCTCCAGTTCGAGTGAGAGCGATCCGGAGAAGAGGGGCCCC
AGTGGCTCCCATGTGAACTCCATTGGTGAGCTGTACGACTCCATCAGCCC
ACTGCTGATGCAACAGCGTTACGTTGAGCTCTCCGTGTCCCATCGCCAAA
GTCGTCGGCAGTTAGCCAAGAGGGAAAAGGCTCTCAAGGTACTTCAAAGC
AAAACGGAGCAGCTGCACTCCAAATACGACGAGCTATTCGATGAGTACCG
GAGTGAACAGCGCCGTTTCGAGATGCTGTGCACTCGCTATATTCAAATGC
AGTTGAAGAAGAAACAGCAAATCTTCAATCTAAAGAATACACTCGGTCAG
GCTAGCGAGTGTATATTCCATGCCCAGGTGGTCATCGATGAGTGTTGTCA
TGCGGAGAAGTCGCCCATTTCTCGGGAGATCTGGAAATCTTTCGCAGGAA
TCTGGAGTGCTTTATGGATGCGCTCAGACTGCTGCTGCTGCGAAGTCACG
AGCTTCAGCAGCAGCAGCCGCAAAAGGAGAAATGGAAAGTGTCGAACAGA
TTCAGTCGATGACTGCTCCACACGGAGCCAGGACGCTCAGTCAGAGCAGA
GTATGAACCCTAATTTCAGAGTCTCTCAATCGACTTCTCGTA
UFO10383.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:35:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13455-RA | 1414 | CG13455-RA | 142..1246 | 9..1092 | 4770 | 96.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:35:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 15496715..15497281 | 9..575 | 2790 | 99.5 | Plus |
| 3L | 28110227 | 3L | 15497342..15497760 | 568..979 | 1730 | 96.4 | Plus |
Blast to na_te.dros performed on 2014-11-27 00:35:29 has no hits.
UFO10383.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-12-08 11:28:47 Download gff for
UFO10383.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13455-RA | 171..1154 | 2..980 | 98 | <- | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:27:09 Download gff for
UFO10383.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13455-RA | 139..1122 | 2..980 | 98 | <- | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:10:48 Download gff for
UFO10383.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13455-RA | 139..1122 | 2..980 | 98 | <- | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 01:10:48 Download gff for
UFO10383.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 15496712..15497274 | 2..568 | 99 | -> | Plus |
| 3L | 15497343..15497763 | 569..980 | 96 | <- | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:27:09 Download gff for
UFO10383.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 15489812..15490374 | 2..568 | 99 | -> | Plus |
| arm_3L | 15490443..15490863 | 569..980 | 96 | <- | Plus |
