UFO10391.5prime Sequence
1056 bp (933 high quality bases) assembled on 2011-12-08
> UFO10391.5prime
CAGTCGACATGCTAAGATGCCCGAAAGTGACCCAGTCGATGCTGGCCAGG
ATCAGCGTCCGCCACTTCGCAGACGAGATCCACGGCAGTGTGCGAGCGGC
CTACGCAAAAGGAGACGCTCGAGCTGATCCGGTCAATGTGCTGCCCAAGT
CCAAATACGGTGGAATCAATACGGTCTCTCTGGTCACGGGCACCACCATC
ATTGGCCAGCAGGGAGCCCAATTCGTGTCATCCCTGCTTTCGAGCAGCCG
CGTCCCTGTGGAGGTCCAAGTCATCGAAGCTGGCCAAGATGACGAGTACT
TCCACTCGGTGCTCCGGAACAGAACCGCCGTTCATGTGGACAATCAGGCG
GACGCGGAAGCTAAGCAGAAGGCGCTCAAGATCTGCAATGATCTGGACTT
GTACGTCTTCAAGACCCGGACACGCAGCTTTCCCGGCTTCAAGTGCCGCT
TTCCGGGCGTGGACATCCAGTTAATCGGTCAGAACAACATGGGTATCTTC
AACGAACTGGAATATTCACCCGTGGAGGGAGTGGTGGAGGCCCTGTCCGT
CGTCTCCCAAAAAGGCAATGACAAGTATCTGCGGTACGCCTTTAAGGCGG
CTGCAAAGGCGGGCCGGAAACGGGTGACGCTGATCAACAAGGCCAAGGAG
TGGCCCATTAGCGATGGCTCACTGGTGGAAGCCGCCCAGCGCTTGCACTG
CCACTACAAGGATTGCCTGGAGCTGGAGCTCATGGAGGTGGAGGAGGCCA
TCAGCCGGCTGATGACGGAGCCCACCTACTTCGATTGCCTCTTCGCCAGC
GAACGCTATGCCACGTTCCTATCCGCCATATGCAGTGGAGTCTGTGGGCG
GGGCTAATCTCTTCAGTGCGGTGGAGATCGGAGATCACCATGCCGTTTTC
AAACCGCTCCAGACGAACTATCCCTGACCACTATGCAATCTAGTGCCTAC
GCATCGTGTCCACATTGTGATCTCTTCAGCATCTGGACATGATAAGTGCG
CCGATGCTTGTGGTGCCATGAAGCCACATGGACGAGTCATTCCGCACCAG
ATCGGT
UFO10391.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:36:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7755-RA | 1317 | CG7755-RA | 86..1139 | 9..1049 | 4655 | 97.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:36:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 16281940..16282861 | 930..9 | 4410 | 99 | Minus |
Blast to na_te.dros performed on 2014-11-27 00:36:54 has no hits.
UFO10391.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-12-08 11:28:54 Download gff for
UFO10391.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7755-RA | 86..1112 | 9..1024 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:27:53 Download gff for
UFO10391.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7755-RA | 86..1112 | 9..1024 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:11:21 Download gff for
UFO10391.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7755-RA | 86..1112 | 9..1024 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 01:11:21 Download gff for
UFO10391.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 16281835..16282861 | 9..1024 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:27:53 Download gff for
UFO10391.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 12169340..12170366 | 9..1024 | 97 | | Minus |
