UFO10392.5prime Sequence
1084 bp (966 high quality bases) assembled on 2011-12-08
> UFO10392.5prime
CAGTCGACATGGATAATGAAAGGATGTCCGCCGTGAGCGAGCACTCAAGT
GTGGTATGCTCTCCCGAACAGATGGCCCAGAAGATCAAAGCCGGTCCCGT
TGTGGATGTCCTCGGTGACGAGATGACCCGCATCATTTGGGACTCCATTA
AGAGCCAACTGATTCTGCCCTTCCTGGACATTGAGCTGCATACCTACGAT
CTGGGTATTGAGAACCGCGATAAAACCGAGGACCAGGTCACCATTGACTG
TGCTGAGGCCATCAAGAAGTACAACGTGGGCATCAAGTGCGCCACAATCA
CTCCCGACGAGAAGCGCGTAGAGGAGTTCAACCTGAAGAAGATGTGGAAG
TCGCCCAACGGTACCATCCGTAACATCTTGGGAGGAACCGTCTTCCGTGA
GGCAATCATCTGCAAGAACGTGCCCCGTCTGGTGACTGGCTGGCAGAAGC
CTATTGTGATCGGTCGCCATGCCCACGCCGATCAGTACAAGGCCGTCGAC
TACGTGGTTCCCGGACCCGGCAAGCTGACCCTCACCTGGAAGGGAACCGA
CGGTCAGGTCATCGATGAGGTCATTAATGACTTCAAGGGCCCCGGTATTG
CCCTGGGAATGTTCAACACGGACGATTCCATTGTGGACTTTGCCCACGCC
TCTTTCAAATATGCTCTGGACCGCAAGCTGCCGCTGTACATGAGCACCAA
GAACACCATTCTGAAGAAGTACGATGGACGCTTCAAGGACATATTCGAGG
ACCTGTACAACAAGCAGTACAAGAAGGAGTACGAGGCGGCGGGCATCTGG
TATGAGCACCGTCTCATCGACGATATGGTTGCTTATGCCATGAAGTCGGA
GGGTGGCTTCGTGTGGGTCTGCAGAACTACGACGGTGATGTGCAGTCGGA
CTCCGTTGCCCAGGATACGGATCTCTGGGTCTGATGACCTCCGTGCTGCT
ATGCCCGATGGCAGAACGTGAGCTGAGCGCTCACGAACGTGACGCGTCAC
TTCCGCCTCTACAGCAGCAGAGAACTCCACCAACTCATGGCTCGAATTCC
TGAACCTGGCTGCTGCATTGTGCCAGCTGACCAC
UFO10392.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:37:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Idh-RK | 1974 | CG7176-RK | 409..1499 | 8..1075 | 4740 | 96.8 | Plus |
| Idh-RD | 1642 | CG7176-RD | 77..1167 | 8..1075 | 4740 | 96.8 | Plus |
| Idh-RF | 1646 | CG7176-RF | 113..1171 | 40..1075 | 4580 | 96.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:37:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 8357019..8357937 | 956..40 | 4420 | 99.2 | Minus |
Blast to na_te.dros performed on 2014-11-27 00:37:02 has no hits.
UFO10392.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-12-08 11:28:55 Download gff for
UFO10392.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Idh-RD | 73..1097 | 1..1020 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:27:57 Download gff for
UFO10392.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Idh-RD | 73..1097 | 1..1020 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:11:24 Download gff for
UFO10392.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Idh-RD | 73..1097 | 1..1020 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 01:11:24 Download gff for
UFO10392.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 8356944..8357935 | 42..1024 | 97 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:27:57 Download gff for
UFO10392.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 8350044..8351035 | 42..1024 | 97 | <- | Minus |
