UFO10404.5prime Sequence
1171 bp (1034 high quality bases) assembled on 2011-12-19
> UFO10404.5prime
CAGTCGACATGATGTCGTTCGGCAAGATTGTGGTATTCCTGGTCCTAGTC
CTAGTTCAACTAATCCATTGTACGCGCTTTACTGCGCCATCTTTGGACAG
GACCATCTACTACCGGAATACGCCACCCGATCCCTTCGGTCACTACAGCT
TCGAGTTCCAGACCACCAACGGCATTACCACCAAGGGAGCTGGTAATGAG
AACGGAGCCGTCGGAGTGGTTCAGTTCGTTTCTCCCGAGGGTATACCCGT
TACCTTCTCGTACGTGGCCGATGCCAATGGATATCAGCCCACCGGAGATC
ACATTCCCGCCATCCCGCTGCACGTTATCCGCCAGTTGGAGTACATCCGC
ACGCATCCACCGGTGGATGAGATTCGGTCCAGACGTTGGGCAAGCTTTCT
AGACCATTCGTTTGGCGCGCGGGCCCAGGTAAGTGGTCATAATCATAATC
ATAATCATAATCATAATCACAACTAGCCTAGGAGATCCTGGTCATGACTA
GTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCT
GAACAAATCCAGATGGAGTTCTGAGGTCATTACTGGATCTATCAACAGGA
GTCCAAGCGAGCTCGATATCAAATTACGCCCCGCCCTGCCACTCATCGCA
GTACTGTTGTAATTCATTAAGCATTCTGCCGACATGGAAGCCATCACAAA
CGGCATGATGAACCTGAATCGCCAGCGGCATCAGCACCTTGTCGCCTTGC
GTATAATATTTGCCCATGGTGAAAACGGGGGCGAAGAAGTTGTCCATATT
GGCCACGTTTAAATCAAAACTGGTGAAACTCACCCAGGGATTGGCTGAGA
CGAAAAACATATTCTCAATAAACCCTTTAGGGAAATAGGCCAGGTTTTCA
CCGTAACACGCCACATCTTGCGAATATATGTGTAGAACTGCCGGAAATCG
TCGTGCTATCACTCCAGAGCGATGAAAACGTTTCAGTTTGCCTCATGAAA
ACGGTGTAACAAGGGTGACCTATCCCATATCACCAGCTCACGTTCTTTCA
TTGCATACGAATTCGGATGAACATTCATCAGGCGGCAAGAATGTGGAATA
AAGGCCCGATACTGTGTCTATTTTTTCTTAACGGTTTCAAGGCCGTAATC
AGCTGACGGTGTTAAGGTACA
UFO10404.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:25:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Cpr78Ca-RA | 876 | CG11310-RA | 134..514 | 9..389 | 1905 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:25:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 21292222..21292586 | 389..25 | 1825 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 20:25:50 has no hits.
UFO10404.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-12-19 13:52:35 Download gff for
UFO10404.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cpr78Ca-RA | 1..384 | 9..393 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:50:47 Download gff for
UFO10404.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cpr78Ca-RA | 128..517 | 1..393 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:21:33 Download gff for
UFO10404.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cpr78Ca-RA | 128..517 | 1..393 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed on 2014-11-27 21:21:33 has no hits.
Sim4 to na_arms.dmel.RELEASE5 performed on 2013-08-04 17:50:47 has no hits.
