UFO10406.5prime Sequence
1162 bp (1043 high quality bases) assembled on 2011-12-19
> UFO10406.5prime
CAGTCGACATGAAAGTTATTATTTTGCTGGCTCTCTTCAGCCAGATTATC
CTGGAAATTGTTGCCTATGAGCATAAAATCGCTCACAGGAAATGTGGCGA
GAACACTTTCCCAGATTGTTATTCATATTGTAACAAAGGATGCAAGGATA
ACCCAGTCGACTGCATTCATTACTGCGAGAAAGGATGTGGATGCATCGAA
GGCTCAATAGTGAGAAACAATGGAGGATGCCGAAGAATAAAGATTTGCGA
CAAGGATGATGATTCCCTATCCGTTGAAAATAACGAGTTGGCTGAAAAAT
ACGTAACATCTTATTGGGAGGACCCGGTAAATAGTAATGAAAATGAAAAT
CAAGCCCAAACGTTAGATGGTTTGGATGAAAACAAATCGGGTGAGATAAA
AAGCATGGAACAGCCGAATGAAGTGCCGCCGGAGAGTCCTTCGGAGGATG
CTCCCAATGATCCCAAGCCACCAGTAGATGCAGTGGCAAGCTTTCTAGAC
CATTCGTTTGGCGCGCGGGCCCAGGTAAGTGGTCATAATCATAATCATAA
TCATAATCATAATCACAACTAGCCTAGGAGATCCTGGTCATGACTAGTGC
TTGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAAC
AAATCCAGATGGAGTTCTGAGGTCATTACTGGATCTATCAACAGGAGTCC
AAGCGAGCTCGATATCAAATTACGCCCCGCCCTGCCACTCATCGCAGTAC
TGTTGTAATTCATTAAGCATTCTGCCGACATGGAAGCCATCACAAACGGC
ATGATGAACCTGAATCGCCAGCGGCATCAGCACCTTGTCGCCTTGCGTAT
AATATTTGCCCATGGTGAAAACGGGGGCGAAGAAGTTGTCCATATTGGCC
ACGTTTAAATCAAACTGGTGAAACTCACCCAGGGATTGGCTGAGACGAAA
AACATATCTCATAAACCCTTTAGGGAAATAGGCCAGGGTTTCACGTAACA
CGCCACAATCTGCGAATATATGTGTAGAAACTGCCGGAATCGTCTTGTAT
CACTCCAGAGCGATGAAACGTTTCAGTTGCTCATGGAAACGTGTAACAGG
GTGAACCTATCCCATATCACCAGCTCACCGTCTTTTCATGGCATTACGAA
AATTTCTATGAT
UFO10406.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:25:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Sfp53D-RB | 820 | CG42477-RB | 30..506 | 9..485 | 2385 | 100 | Plus |
| Sfp53D-RA | 577 | CG42477-RA | 30..506 | 9..485 | 2385 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:25:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 16744609..16745085 | 485..9 | 2385 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 20:25:57 has no hits.
UFO10406.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-12-19 13:52:36 Download gff for
UFO10406.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Sfp53D-RA | 14..507 | 1..497 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:50:52 Download gff for
UFO10406.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Sfp53D-RA | 14..507 | 1..497 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:21:35 Download gff for
UFO10406.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Sfp53D-RA | 24..517 | 1..497 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed on 2014-11-27 21:21:35 has no hits.
Sim4 to na_arms.dmel.RELEASE5 performed on 2013-08-04 17:50:52 has no hits.
