UFO10422.5prime Sequence
1141 bp (1018 high quality bases) assembled on 2011-12-19
> UFO10422.5prime
CAGTCGACATGGATAATCATATGGATAAGAACGATGAGGACAAGAGGTCG
TCATCCCCGGATTCTCAACGTCAAGTTATAATATATATGCCACCCGCCGT
TGAACATGGTCATGTTGTGTATCTAAAAGATGCGAATTTAGGCGCCACAG
AGACGGAGGCTTCTGCACAACTCGACCCACAGGAGCATCTTTCGAATGCG
GATCGGTTGGAGAACAATCGGGTGATTTCAGAGCTGGATGATGAGCCGAG
CACGAGTGCTCAGTCCGCAGTTAAGGGTCAGAAATCAGAAGATGATCAGG
GTCACCAGACCAAGACAGGTATTTCAAAAATGCCAGGATCTCCTAAGCAG
TTGCACAATGTATTGGAAGTAATCTGTCGCTTCTCACGCGAGATTCCTGA
TGCAATGGAGGGCCGGGAGCAACTCCAGCCGGCAGTGATTGTCCAAATTC
CAAAATATCGCGAACTGGGAACCCAGACCGCTGAGTTGCCATCGCAGTCG
CAGCGATTGCGTTTGGATCTGACCGACCTGAGACCAGATCCGAATCCACC
GCCCTGCGAACGCACGCTGCACACATTCACGATTAGTGGCAACAATCTGC
CGGGCAATCCTCGCCAGCTTCGTCAAACGATCTGCGCGCGAATTGGACGC
TCCATCTGTGATTTTGTGGCAGCCTTTTGTCTTTGTCTGCAAGTGAACAA
GGATTGTGTCTTCTGTCTGGGTTTTTTTGTGGCCTTTGTGATCAGTGCCA
GCTTCCTGACTGCCTTCTTCTACCGCACTCTTACCTTCTCCTCGTCGCCG
GTGCGAGTGGTGGGCCAATCCGGTGAGCGGCCCCATGCGCTATGAACTTG
CCACACTGCGATTCAACGGAGGGTACTACTACATCTATAATAGCAGCCAA
CAAAGCTTCTCGCAAGCTTTCTAGACATTCGTTTGGCGGGGCGGGCCCAG
GTAGGTGGTCATAATCATAATCAATATCATAATCATAATCACAACCTAGC
CTAGAGATCCTGGTCATGACTAGTGCTTGGAATTCTACCAATAAAAAACG
CCGGCGCACCGAGCGTTCTGAACATTCGGATGGAGTCTGGAGTCTTTCTG
TGATCTATCACAGGATTCAACGCGGCTCTGAATACTAATTT
UFO10422.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:26:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG16853-RB | 1053 | CG16853-RB | 72..974 | 9..911 | 4455 | 99.7 | Plus |
| CG16853-RA | 1293 | CG16853-RA | 385..1287 | 9..911 | 4455 | 99.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:26:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 13542652..13543546 | 9..904 | 4415 | 99.8 | Plus |
Blast to na_te.dros performed on 2014-11-27 20:26:19 has no hits.
UFO10422.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-12-19 13:52:38 Download gff for
UFO10422.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG16853-RA | 378..1293 | 1..918 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:51:05 Download gff for
UFO10422.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG16853-RA | 378..1293 | 1..918 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:21:46 Download gff for
UFO10422.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG16853-RA | 378..1293 | 1..918 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:21:46 Download gff for
UFO10422.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 13542645..13543560 | 1..918 | 98 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:51:05 Download gff for
UFO10422.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 13542645..13543560 | 1..918 | 98 | == | Plus |
