UFO10511.5prime Sequence
1043 bp (1034 high quality bases) assembled on 2012-01-06
> UFO10511.5prime
CAGTCGACATGGGTCGCAGTAAGGTGTTAAGAAAGAAGCAATCTAGCAAG
AAGCGACGACATACAATTGATCAAGAAAATACAGACGATTATTATATGAC
ACCCGAAGAAGTACGGCAATCGGTTGAGCGGTGGTCATTCCTTTGGCACT
GTAGTGATTCTGATTCTGATTCTAATTCCGAATCGGAGAGCAGTTCAACG
TCATCATTGTTGCAACATGATCCATCTCTGTATGGAGACTGGCGTGTGCG
GGGTGAAGAATTCAAATTAGAGACTACCGGCAAGGAAATGCTGATGAATT
TAAGCAAATTTCCCTTTCCGGAGATAATCAAACCACCCGTTTTGCTGGAT
ACTAAGTTGCCCAAAACCCTGCGGGTTAATCACTGGCCCTATATTACACA
CAAAATTTTCGACTACGTAATGCCGGACATATATTTTCGGTCCATGGAGT
TCATGAAGAAACCCGTATGTGAGGGAGCCGTGGGTTATGATCCTTTGTAC
TATGGCTCATCAATTTTGATCAAACCTCTGTGCAAGTACAGTAAGCCACG
CAATTTTTCACCCACATGGACCAATACTAGCTTGGTGTCCTGGATAGATG
GGCGTCGTTTTGCCAAGATGGTGAAACGTAATGACTCGCAGATGGGTAAT
GAGAAGCTACTTCGGTGGACTAAGGTTCGCCCGTTTTGGAGCAATAAACT
CCTGGCTGGACTTAGAAAGGACCCGGACGCTAAACTAATTGTAAAGTGGA
AGCGTCCCAGGACAAGATTTTCTTTTAATCCGGAATCCGATGCGATGGAC
AAACAATGGGATATGCCCGAGGAGGACCCGTTGCCATCGGATGAGTTTTA
CGTAGAATATGTAATGAATGATGATCCCGAAACACACGATCATGGAACTC
CTCGTTGTCTGACGATTCTATGCCGGGAATAACTAAATTCCCAGTCTGAT
CTCAATCTCGAATATTTAAAGAATAAGGCCGATATTAGACGTTTGTTCAT
AGTTCGGAGCAGTCTTTTTTGCAAGCCTTTCTAGGACAATTCG
UFO10511.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:28:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32720-RB | 1335 | CG32720-RB | 71..1079 | 9..1020 | 4880 | 99.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:28:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 7535912..7536889 | 987..9 | 4735 | 99.6 | Minus |
Blast to na_te.dros performed 2014-11-27 20:28:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| transib2 | 2844 | transib2 TRANSIB2 2844bp | 2539..2571 | 157..189 | 120 | 84.8 | Plus |
UFO10511.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-01-06 09:40:52 Download gff for
UFO10511.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32720-RB | 1..1011 | 9..1021 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:52:10 Download gff for
UFO10511.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32720-RB | 71..1079 | 9..1020 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:22:39 Download gff for
UFO10511.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32720-RB | 71..1079 | 9..1020 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:22:39 Download gff for
UFO10511.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 7535881..7536889 | 9..1020 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:52:10 Download gff for
UFO10511.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 7429914..7430922 | 9..1020 | 99 | | Minus |
