UFO10517.5prime Sequence
1155 bp (1056 high quality bases) assembled on 2012-01-06
> UFO10517.5prime
CAGTCGACATGAATCATCTGTTCGTGTTAACTTTTATTCTGCTTTTTGCC
TTTGCCTTGGGATCCGAAGGTGAATTGACCGAAATGTGCCAACCACAATT
AAACAGAAGAGACCTATTCGACATAGCCGTGTTGGCCGCCATAAAGGTTC
TCATCCGTCAGATTGAGAGCTACAACGAGGATCGGCCTATCTCTTCAAGC
CTGATGGTTCACATTACGACTATGGTCTCCAAGTACATCCTGACCGGTAA
GAGCGTAAAGTTCATCCTTCGGCTGCTCTATGTGGCATGCCGTATGAACA
AACCGCTGACACAAGAAAATAAAAAACAAGCTCCAGTCCGCACAGCATTC
TTATGCTTGTTGGAATTGGGCAAAGAAAAGTGCTATACATACAAGGAAAA
GGCGGAAGGAGACTTCTCTGTGGAGTTGCAAGCAAGCTTTCTAGACCATT
CGTTTGGCGCGCGGGCCCAGGTAAGTGGTCATAATCATAATCATAATCAT
AATCATAATCACAACTAGCCTAGGAGATCCTGGTCATGACTAGTGCTTGG
ATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACAAAT
CCAGATGGAGTTCTGAGGTCATTACTGGATCTATCAACAGGAGTCCAAGC
GAGCTCGATATCAAATTACGCCCCGCCCTGCCACTCATCGCAGTACTGTT
GTAATTCATTAAGCATTCTGCCGACATGGAAGCCATCACAAACGGCATGA
TGAACCTGAATCGCCAGCGGCATCAGCACCTTGTCGCCTTGCGTATAATA
TTTGCCCATGGTGAAAACGGGGGCGAAGAAGTTGTCCATATTGGCCACGT
TTAAATCAAACTGGTGAAACTCACCCAGGGATTGGCTGAGACGAAAACAT
ATTCTCATAAACCCTTTAGGGAAATAGGCAGGTTTCACGTAACACGCCAC
ATCTTGCGAATATATGTGTAGAACTGCGGAAATCGTCGTGTATTCACTCA
GAGCGATGAACGTTTCAGTTTGCTCATGAAAACGGTGTACAGGGTGAACA
CTATCCCATATCACCAGCTCACGTCTTTCATGCATACGAATCGATGACAT
CATCAGGCGGCAAGAATGGAATAAGGCCGATAAACTGTGGCTTTATTTTT
TCTTA
UFO10517.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:30:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG43111-RA | 553 | CG43111-RA | 41..463 | 9..431 | 2115 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:30:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 19552162..19552582 | 11..431 | 2105 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 20:30:40 has no hits.
UFO10517.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-01-06 09:41:03 Download gff for
UFO10517.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG43111-RA | 35..469 | 1..439 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:53:10 Download gff for
UFO10517.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG43111-RA | 35..469 | 1..439 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:23:33 Download gff for
UFO10517.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG43111-RA | 35..469 | 1..439 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed on 2014-11-27 21:23:33 has no hits.
Sim4 to na_arms.dmel.RELEASE5 performed on 2013-08-04 17:53:10 has no hits.
