UFO10518.5prime Sequence
1162 bp (1070 high quality bases) assembled on 2012-01-06
> UFO10518.5prime
CAGTCGACATGGACTGCGCACCACTGAACTTGGCTCATTTCCACGAGCGA
AGGTCGGAGCGATTTATACGCAATCACCGCTATGAGGAGGCCATTAAAGC
GCTGGAAACATCCCTAATCTACATGCAGGATGCCCAAAAACGGGTGGCTC
TGCCCAAATCCAAGGAAGTTCTGGACACATTGACCCTCGATTTTCAGCGC
AAACTGCGTCAAATTGAGATGCGAAAGACGCAGCATGGTCTGAACAAGCT
GAAGGATTATGCTCCCTTGAAGGAAACCAGTCCCATGCTGCCCCTGCGAC
CAGAAGCCGGAGCAAGTGGAGGCGCAGGAGGATCCGCTCAGTCGGTGGCC
AAGGCAATCGACAAAACAGTGCAGGACTTCGATGCCAAGTTCACCTCCTC
CTTGGTGGCAAAGGCCTCTAGCACACTGGCCCATTCGGAGCCCCATATGG
AGACGCTGAAGAAGAGCGATTCTGCCCAGGAGGAGCAGGAACACGATACT
TGCGATCAGCGGCTGGCGGGCAGTGGAGACCTGGACCTGCCATCCTTGGC
GCCCTTGGAGTTGCCCTCCTTCGATTACAGCCTGTTCACCAGCTCCTCGG
CTCCTTCGTTGGCCAGCTATGCCGGCATGGCTGAGAGCTTCCAGAAAGCA
AGCTTTCTAGACCATTCGTTTGGCGCGCGGGCCCAGGTAAGTGGTCATAA
TCATAATCATAATCATAATCATAATCACAACTAGCCTAGGAGATCCTGGT
CATGACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCG
AGCGTTCTGAACAAATCCAGATGGAGTTCTGAGGTCATTACTGGATCTAT
CAACAGGAGTCCAAGCGAGCTCGATATCAAATTACGCCCCGCCCTGCCAC
TCATCGCAGTACTGTTGTAATTCATTAAGCATTCTGCCGACATGGAAAGC
CATCACAAACGGCATGATGAACCTGATTCGCAGCGGCATCAGCACCTTGT
CGCCTTGCTATATATTTGCCCATGTGAAACGGGGCGAAAAGTTGTCATTA
TTGGCCACGTTAAATCAAACTGTGAACCCCACCAGGATTGCTGAAACGAA
AACCTATTTCTCCATATAACCCTTAAGGAATATAGGCCAGGTTTTCACCC
GTACAAAAGCTC
UFO10518.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:30:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG42554-RA | 1023 | CG42554-RA | 163..803 | 7..647 | 3205 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:30:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 835935..836550 | 32..647 | 3080 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 20:30:48 has no hits.
UFO10518.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-01-06 09:41:04 Download gff for
UFO10518.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG42554-RA | 30..682 | 1..648 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:53:15 Download gff for
UFO10518.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG42554-RA | 154..808 | 1..653 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:23:36 Download gff for
UFO10518.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG42554-RA | 154..808 | 1..653 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:23:36 Download gff for
UFO10518.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 835936..836555 | 33..653 | 99 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:53:15 Download gff for
UFO10518.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 835936..836555 | 33..653 | 99 | == | Plus |
