UFO10524.5prime Sequence
994 bp (991 high quality bases) assembled on 2012-01-06
> UFO10524.5prime
CAGTCGACATGGAAGAACTTGTAGATCTGGATGAACCTTATCTGTATATG
ATTGGCATACCGACTGAACTTCGCGTGCACTGGGCCTACATAGTTGATTT
TCTACGCCCAGAAGAGAATCGTCAACAAATCAACGACCCAAATGTGGAAT
TAGTGCCCCTCTCACAACGGCAATACCGAGAAGAGACTACGGACTTGGAA
GTGGTGCCCTTACCACAAGAGCCGAGCATTGACCTATCTGGTGCTGGCGA
TGGACACCACGTCATTCCCCGGATCGGTGATAACGAAATGCCGACTGTGA
TTATCTTTCTGCCCAGAATAATGCCATTACCCTGGTCCAGTTTAAAGCGT
CTGAAGCCGGTGATCATTGCGGCCTCAAATATTCTCTTCAGAAAGATACT
GTCCCATTTTGGAATCGATTTAAATCAAGTCTTTGCCCTCGGCTTGTCAT
ACAATACCCATTTAACAATATTTCACTGCTTTATGGAATACCTTACATCC
TGGATAACTGGGGCAAGCTTTCTAGACCATTCGTTTGGCGCGCGGGCCCA
GGTAAGTGGTCATAATCATAATCATAATCATAATCATAATCACAACTAGC
CTAGGAGATCCTGGTCATGACTAGTGCTTGGATTCTCACCAATAAAAAAC
GCCCGGCGGCAACCGAGCGTTCTGAACAAATCCAGATGGAGTTCTGAGGT
CATTACTGGATCTATCAACAGGAGTCCAAGCGAGCTCGATATCAAATTAC
GCCCCGCCCTGCCACTCATCGCAGTACTGTTGTAATTCATTAAGCATTCT
GCCGACATGGAAGCCATCACAAACGGCATGATGAACCTGAATCGCCAGCG
GCATCAGCACCTTGTCGCCTTGCGTATAATATTTGCCCATGGTGAAACGG
GGCGAAGAGTTGTCCATATTGGCCACGTTTAAATCAAAACTGGTGAAACT
CACCCAGGGATTGGCTGAGACGAAAAACATATTCTCAATAAATC
UFO10524.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:30:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG42710-RA | 702 | CG42710-RA | 98..601 | 9..512 | 2520 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:30:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 8781900..8782403 | 512..9 | 2520 | 100 | Minus |
Blast to na_te.dros performed 2014-11-27 20:30:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| BS | 5142 | BS BS 5142bp | 2465..2510 | 915..870 | 113 | 71.7 | Minus |
UFO10524.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-01-06 09:41:01 Download gff for
UFO10524.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG42710-RA | 92..598 | 9..516 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:52:56 Download gff for
UFO10524.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG42710-RA | 98..604 | 9..516 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:23:18 Download gff for
UFO10524.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG42710-RA | 98..604 | 9..516 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:23:18 Download gff for
UFO10524.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 8781897..8782403 | 9..516 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:52:56 Download gff for
UFO10524.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 8781897..8782403 | 9..516 | 99 | | Minus |
