UFO10538.5prime Sequence
1107 bp (1026 high quality bases) assembled on 2012-01-06
> UFO10538.5prime
CAGTCGACATGCGTACCCTTATCCTTGTTACTCTTGTTGCCCTGGTCGCA
GTGGCCTCCGCCCAAGGACCTGGTCCTTGGGGTCCCGGTGGACCTGGTGG
ACCTGGTGGACCAGGTCGTGGTCGCGGAGGACCAGGACGTGGACCTGGCG
GACCAGGTGGCCCAGGAGGTCGCGGACCTGGAGGACCTGGAGGACCAGGA
GGCCCAGGAGGCCCAGGAGGACCAGGAGGACCAGGAGGCCCAGGAGGACC
AGGATGCCCAGGAGGACCAGGTGGACCAGGAGGCCCCAAACCATGGGGAC
CTCCATCCAACCAAACCACATCCACGACAACTGAGGCCTCAACAAGCACT
TCCACCACGACAGCTTCGTCCACTACAGTGTCCTCCACTACAGAGTCCTC
TACGGAATCCTCGACGGAATCATCCACAGCATCCTCCACAGAAGCAAGCT
TTCTAGACCATTCGTTTGGCGCGCGGGCCCAGGTAAGTGGTCATAATCAT
AATCATAATCATAATCATAATCACAACTAGCCTAGGAGATCCTGGTCATG
ACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCG
TTCTGAACAAATCCAGATGGAGTTCTGAGGTCATTACTGGATCTATCAAC
AGGAGTCCAAGCGAGCTCGATATCAAATTACGCCCCGCCCTGCCACTCAT
CGCAGTACTGTTGTAATTCATTAAGCATTCTGCCGACATGGAAGCCATCA
CAAACGGCATGATGAACCTGAATCGCCAGCGGCATCAGCACCTTGTCGCC
TTGCGTATAATATTTGCCCATGGTGAAACGGGGGCGAGAAGTTGTCCATA
TTGGCCACGTTTAAATCAAAACTGGTGAACTCACCCAGGGATGGCTGAGA
CGAAAACATATTCTCATAACCCTTTAGGGAATAGCCAGGTTTCACCGTAC
ACGCCACATCTTGCGAATATATGTGTAGAAACTGCCGGAATCGTCGTGTA
TCACTCCAGAACGATGAAATCGGTTTCAGTTTGCTCATGTAAACGTGTAC
ACGTTGACCCTATCCATTTCACAGCCCACCGTCTTTCATTGCATCGAATC
CGGATGA
UFO10538.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:32:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| lcs-RA | 590 | CG12794-RA | 33..471 | 5..443 | 2180 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:32:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 21396846..21397284 | 443..5 | 2180 | 99.8 | Minus |
Blast to na_te.dros performed on 2014-11-27 20:32:44 has no hits.
UFO10538.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-01-06 09:41:14 Download gff for
UFO10538.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| lcs-RA | 9..457 | 1..447 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:54:15 Download gff for
UFO10538.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| lcs-RA | 9..457 | 1..447 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:24:22 Download gff for
UFO10538.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| lcs-RA | 26..474 | 1..447 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed on 2014-11-27 21:24:22 has no hits.
Sim4 to na_arms.dmel.RELEASE5 performed on 2013-08-04 17:54:15 has no hits.
