UFO10552.5prime Sequence
1168 bp (1042 high quality bases) assembled on 2012-01-06
> UFO10552.5prime
CAGTCGACATGACTGCCCGCATGATCCAACGCGGCCTGCACACTGCTCGC
TCCTGTCTGTTGGCGAGAGCTCCTCGTCGCGCAAATCCTGGACTAGGTTA
CCAGCTGGAGCAGCTGCAGGAGCACCCGGAAAAGAGCAGCGAAGCTAGCG
AGGATTACGCCGATCTGGAGTCGGATTTCATGGACGTGCAGAAGACCCAT
CGGCAGTACGAGAGGGAGCAGCAGCAGCATCGCGACCGCATCCGTCAGTT
TATGATAAAGCACAAGTATTTCCGAGACGCCAAGTTGCCCAATCTCTTGC
TTCATGCCGAAAAGGAGCAGATGCGCCTGCTGCACGAGCGAGATCCCGAG
GAATGGAGCGTTGAGCGATTGGCCGAAAGTTTTCCCGCCACTCCGGACAT
TGTGCAGAAAATTCTGCGGGCCAAGTGGCGACCGAGAAGTGTGCAAAGGA
TACGCTCCCACGATGAAACCGTCATTAAAAACTGGCAGCTTTTAGGGACG
GGAAAGGGTGACTTCAGTATCCCACCGTCTCTTCTCCAGCATCTGCAGAA
ATTCGCCGAGCGAAGGTGGCAGGATCTGCGGGAGCTTAAAATCCAGGATT
GGCCCACAAAATCACAACTACCGACTCCGCAAGGCAACGAATTCCGCAAA
CTGCTGGGCAGCAGTAGTAAAACAACAGAGGAGATGCCTACACCACAAAT
CCCATCCGGCTATGAAGCTCCACCCTCTGCTGCCGAAGATGAAACCTATT
TGTTGGACAAAATCCGTAATAAAAAGAAGATGCGGCTGCAGAGCTTAAGG
AATTGCAGCTCGTTGAGTCTGCGCCCGCAGTTCCAGAGGAAATGAAGCGG
CCCATCGAGAATCCCAGTGGCACCGGATTCCTGCCCAGTTTCGTGCCCAA
GTTTGCGAGCAGCGAGATTGTGATCAGTGCCGCGGATCAGCGCAAGTATG
AAATAACCCAGGTGAAAACACGCATTGTTATTCCCCGGAAACTGCATCGC
AAGAGCCACTTACGGTGGAGGATGCCTATTACGATAACGATGGAAAGCTG
CTCTACCGAGTGCCTGATGACCAGAGCCAGTGGTGATAAGCAGCCTTTCT
AAGACATTCGTTGGCGCGCGTCAGTTAATTGTCTTACTTATCCTATTCCT
AATCCAAATCACCTAGGC
UFO10552.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:34:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4553-RA | 1280 | CG4553-RA | 63..1150 | 9..1089 | 5255 | 99.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:34:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 25475766..25476853 | 1089..9 | 5150 | 99.1 | Minus |
Blast to na_te.dros performed on 2014-11-27 20:34:19 has no hits.
UFO10552.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-01-06 09:41:22 Download gff for
UFO10552.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4553-RA | 56..1155 | 1..1094 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:55:04 Download gff for
UFO10552.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4553-RA | 56..1155 | 1..1094 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:25:11 Download gff for
UFO10552.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4553-RA | 56..1155 | 1..1094 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:25:11 Download gff for
UFO10552.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 25475761..25476860 | 1..1094 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:55:04 Download gff for
UFO10552.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 21301483..21302582 | 1..1094 | 98 | | Minus |
